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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0041s0190.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
GRAS |
Protein Properties |
Length: 646aa MW: 72816.2 Da PI: 6.892 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0041s0190.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 366.8 | 3e-112 | 271 | 641 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
+ L+ cA+av sgd++ a L+++++++sp gd++qRla+yf+++L+arla+++ l++ ++ s++ + ++ l+a++l++ ++P
SapurV1A.0041s0190.1.p 271 TMLILCAQAVGSGDQKTAGGKLKQIRQHSSPFGDANQRLAHYFANGLEARLAGTGMLLSRPISQSSA---TAADILKAYELYVTICP 354
57999************************************************66666655555544...59*************** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgv 174
+ k+++l aN++I + v++++ vHiiDf+i++G+QWp+++ + Rp+gp ++R+Tg++ p++g +e++eetg+rL+++A++++v
SapurV1A.0041s0190.1.p 355 FRKMTNLCANRTISRVVDKATSVHIIDFGIGYGFQWPCFIYRQSLRPGGPGKIRVTGIELPQPGfrPSERVEETGRRLKRLADRMKV 441
***************************************************************9*********************** PP
GRAS 175 pfefnvlvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
pfe+n+ +a+++e++++++L++++ +E+++Vn++++l++l+d++v ++s+rd+vLklvk+++P+++ + + ++ns+ F +rf e
SapurV1A.0041s0190.1.p 442 PFEYNA-IAQKWETIQYDDLKIDRdrDEVIIVNCMYRLKNLPDDTVVVNSPRDDVLKLVKRINPDIFLHGVINGSYNSPFFDTRFRE 527
******.7**************9999************************************************************* PP
GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
al +ysa+fd+lea++pre++er + Ere++gr++ nv+aceg++r+er e +++W+ r + GF++vpl +++ k +k + + +++
SapurV1A.0041s0190.1.p 528 ALFHYSAFFDMLEANAPREDQERLMFEREMIGRDAINVIACEGTQRVERPEPYKQWQTRNLRIGFRQVPLHQSIIKRVKNVKHDYHK 614
**************************************************************************************7 PP
GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
d + v+e+ ++++lgWk++ + ++SaW+
SapurV1A.0041s0190.1.p 615 D-FIVDEDGQWILLGWKGKIVHAISAWK 641
7.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 646 aa
Download sequence Send
to blast |
MDPPSYPTNL QAPADNPSLR SASDGDSPLD SETIDCYHAV LKYIHDILME DGLGDKTCML 60 QDSLALQAAE KSLYDVIGEE YPSSSDHLPP CLIHINERQD ENLTPARSVQ SSVTQPFDSP 120 ESMPYGQFNG VMGSASKSLP YSHSIKFSST KNVSDPLELE GEVMGGDIIQ KNGRGCSSIQ 180 TRGRRNHQHD NNGYLEEGRS KKQSSASESL HLELLDDTFL YNIENGGHIP CPLYGNSRGA 240 RSRKFLQSEQ LAAADTRTRK LANETETDLW TMLILCAQAV GSGDQKTAGG KLKQIRQHSS 300 PFGDANQRLA HYFANGLEAR LAGTGMLLSR PISQSSATAA DILKAYELYV TICPFRKMTN 360 LCANRTISRV VDKATSVHII DFGIGYGFQW PCFIYRQSLR PGGPGKIRVT GIELPQPGFR 420 PSERVEETGR RLKRLADRMK VPFEYNAIAQ KWETIQYDDL KIDRDRDEVI IVNCMYRLKN 480 LPDDTVVVNS PRDDVLKLVK RINPDIFLHG VINGSYNSPF FDTRFREALF HYSAFFDMLE 540 ANAPREDQER LMFEREMIGR DAINVIACEG TQRVERPEPY KQWQTRNLRI GFRQVPLHQS 600 IIKRVKNVKH DYHKDFIVDE DGQWILLGWK GKIVHAISAW KPAQE*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |