PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00027319-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Dof | ||||||||
Protein Properties | Length: 198aa MW: 22294.8 Da PI: 8.7854 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 99.2 | 2.6e-31 | 17 | 71 | 5 | 59 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++cprC stntkfCyynny+ sqPr+fCk+C+r+WtkGG+lrn+P rr+++ SMil_00027319-RA_Salv 17 PSECPRCGSTNTKFCYYNNYNKSQPRHFCKSCKRHWTKGGTLRNIPAARRRRNKR 71 689*******************************************876666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-17 | 7 | 61 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 9.1E-28 | 18 | 70 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 25.471 | 18 | 72 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 20 | 56 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence Send to blast |
MIQQFPGEQS GASKPPPSEC PRCGSTNTKF CYYNNYNKSQ PRHFCKSCKR HWTKGGTLRN 60 IPAARRRRNK RPRASAAAAT EPRQKRLLNS NDQNRMSDIL YQALIRSSPH QGTILESNGT 120 TCAAATQNYT NTEDLMLSSF TSAPTSAEIV DLTEESSAAA PWAAELWSWN DEIDFLASLW 180 DRSDAEMMTP YKPIYQGY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096259.1 | 1e-35 | dof zinc finger protein DOF1.4-like | ||||
TrEMBL | A0A4D9B101 | 4e-76 | A0A4D9B101_SALSN; Uncharacterized protein | ||||
STRING | VIT_00s0652g00010.t01 | 1e-32 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6171 | 20 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 2e-23 | TARGET OF MONOPTEROS 6 |