PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00020197-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 647aa    MW: 71718.7 Da    PI: 6.3189
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00020197-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.4e-11420478563
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            kr++r   NR +A rs +RK ++i eLe kv++L++e ++L  +l +l   +  l s++
  SMil_00020197-RA_Salv 420 KRAKRILANRQSAARSKERKMKYIVELEHKVQTLQTEATTLSAQLTMLHRDSTGLSSQN 478
                            9**********************************************999888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-17416480IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645418481IPR004827Basic-leucine zipper domain
PfamPF001705.4E-10420478IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-10420477No hitNo description
SuperFamilySSF579596.91E-11420470No hitNo description
CDDcd147034.68E-23421472No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    Send to blast
MGGDNEEDNG ETMQRLQSSF GTSSSSLHTQ HHSFQLNQLN IPQLHMPQFR GQIRQPSPNL  60
CGENGGKRVG IPPSHPQIPP ISPYSQIPFN RAGNQQNFVT SPGPSHARSL SQPAFFAVDS  120
LPPLVPSPYR ESTPDQVSTD VAMEEREGGG GSHSMLPPSP FTRGTMSRVG ESLPPRKAHR  180
RSNSDIPFGF SSILQSSPPL IPLRSPGAFD RLGSARENSG AQPVQLVKKE SSWEKVEESA  240
EGMGERKYEG EVVDDLFSAY MNLDNIDAFN SSETDDKLGN ENRDDLDSRA SGTKTNGGDS  300
SDNEATSSVN ESVSSAQKPR VSTLTERREG IKRNAGEDIA PTTRHYRSVS MDSFMGNMNF  360
DESPKMPPSP GTNQLSPTNS LDANTNAFSL EFGNGEFSGA ELKKIMTNEK LAEIASSDPK  420
RAKRILANRQ SAARSKERKM KYIVELEHKV QTLQTEATTL SAQLTMLHRD STGLSSQNNE  480
LKFRLQAMEQ QAQLRDGNAY YIHSLENCFL GSEIEYVMGY LSIIVLAWMN FTQVLNALLD  540
HSKILVVSFC GLPFGWAKPY EKRHLITLHV ALNEALTAEV QRLKFATAEL SGDPSKFQQF  600
SVNPQMFQLR QQQATQMNMH QLQQQRQQQP QQQQVNGNNN AKDETEQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088545.10.0uncharacterized protein LOC105169746
RefseqXP_011088546.10.0uncharacterized protein LOC105169746
TrEMBLA0A4D8YJZ10.0A0A4D8YJZ1_SALSN; Uncharacterized protein
STRINGXP_009804619.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-135bZIP family protein