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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00878.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
GRAS |
Protein Properties |
Length: 535aa MW: 59961.6 Da PI: 4.8403 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00878.1_g00011.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 428.8 | 4.2e-131 | 164 | 535 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
+ L++cA+a+s+++ e+a ++L+++++++s +gdp qR+aay++e+Laar+a s++ lykal+++e + s+e+laa+++++ev+
Rsa1.0_00878.1_g00011.1 164 QMLISCARALSESKPEEALSILNEVRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFLYKALKCKEPP---SDERLAAMQVLFEVC 246
79*****************************************************************9...9************** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeel 172
P++kf++l+aN aI+ea+ ge+ vHiiDfdi+qG Q+++L+++ a+ p++ p+lR+Tg+++pes+ s l+ +g rL+++A+
Rsa1.0_00878.1_g00011.1 247 PCFKFGFLAANGAIVEAIRGEDDVHIIDFDINQGNQYMTLIRTVAELPGKGPRLRLTGIDDPESVqrSVGGLRIIGLRLEQLAKDH 332
***************************************************************9989999**************** PP
GRAS 173 gvpfefnvlvakrledlel..eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
gv+fef++ va+++ +++ +L +kpgE+l+Vn+++qlh+++desv++ ++rde+L++vksl+P++v+vveq++++n+ +F+ r
Rsa1.0_00878.1_g00011.1 333 GVSFEFEA-VASKTCIVSPpsTTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPRLVTVVEQDVNTNTCPFFPR 417
********.677777776523689************************************************************** PP
GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342
f+ea eyysa+fdsl+ +lpres+er++vEr++l+r+ivnvvaceg+er+er e ++kWr+r+++aGF++ p+s+++++++++l++
Rsa1.0_00878.1_g00011.1 418 FMEAYEYYSAVFDSLDLTLPRESQERMNVERQCLARDIVNVVACEGEERIERYEVAGKWRARMMMAGFSARPMSSRVTSSIQRLIK 503
************************************************************************************** PP
GRAS 343 kvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ + y+v+ee g+l+++W d++L+++SaWr
Rsa1.0_00878.1_g00011.1 504 QEYCSKYKVKEEVGELLFCWGDKSLIVASAWR 535
***666*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 535 aa
Download sequence Send
to blast |
MSLVRSAEPS AATYRNPKLH SLNENAYNSG DTSVEVFVPD RSKNTCLTDP SQSYDKYFLD 60 EFVQQQHPVT SSSFGSLDSF PYQSRPVLGC SMDGFDDEQM RSKIQELERA LLSDEDDQLM 120 EVDNEWSYQN ESEQHHNSSS ADSNSHSSSS KEVVSSSSQA TPKQMLISCA RALSESKPEE 180 ALSILNEVRQ IVSIQGDPSQ RIAAYMVEGL AARMAASGKF LYKALKCKEP PSDERLAAMQ 240 VLFEVCPCFK FGFLAANGAI VEAIRGEDDV HIIDFDINQG NQYMTLIRTV AELPGKGPRL 300 RLTGIDDPES VQRSVGGLRI IGLRLEQLAK DHGVSFEFEA VASKTCIVSP PSTTLGCKPG 360 ETLIVNFAFQ LHHMPDESVT TVNQRDELLH MVKSLNPRLV TVVEQDVNTN TCPFFPRFME 420 AYEYYSAVFD SLDLTLPRES QERMNVERQC LARDIVNVVA CEGEERIERY EVAGKWRARM 480 MMAGFSARPM SSRVTSSIQR LIKQEYCSKY KVKEEVGELL FCWGDKSLIV ASAWR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |