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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00350.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
GRAS |
Protein Properties |
Length: 401aa MW: 44351.4 Da PI: 6.7206 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00350.1_g00007.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 357.8 | 1.6e-109 | 39 | 396 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfse 86
+lLl+cAe v++++l++a+ lL+++se++sp g++ +R++ayf +AL+ar+++ s+ ++ l+ ++ ++ + +aal++f+
Rsa1.0_00350.1_g00007.1 39 LSLLLQCAEYVATNHLHEASILLSEISETCSPFGSSPERVVAYFSQALQARVVStYLSRACSHLSNNPPI-HHPHKIFAALQTFNS 123
689***************************************************5556666666555544.4588889999***** PP
GRAS 87 vsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAee 171
+sP++kfsh+taNqaI +a++ge + vHiiD+d++qGlQWp L++ LasRp++ s+RiTg+g+ s++ l +tg+rLa+fA++
Rsa1.0_00350.1_g00007.1 124 LSPLIKFSHFTANQAIFQALNGEeDSVHIIDLDVMQGLQWPGLFHILASRPRKLRSIRITGFGP----SSDILASTGRRLADFAAS 205
**********************989***************************************....9***************** PP
GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFle 255
l +pfef++ v+ ++ + ++++L ++pgEa++V+++ hrl+d ++s + ++++++l+P +v++veqe+++ +++ Fl
Rsa1.0_00350.1_g00007.1 206 LSLPFEFHP-VVGKIGKTDPSRLGTRPGEAVVVHWMQ--HRLYDVTGSDLD----AVEVIRGLRPSLVTMVEQELSCddGGGCFLG 284
*********.7999**********************9..****99999998....9******************666437889*** PP
GRAS 256 rflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341
rf+eal+yysalfd+l +l++es er vE+ +l+ ei+n+v +++ +++Wre l+++GF+pv+l+ + a+qa lll
Rsa1.0_00350.1_g00007.1 285 RFVEALHYYSALFDALGDGLGEESGERFAVEQIVLATEIRNIVGEKKRG-------MMRWREELSRVGFRPVSLRGNPATQAGLLL 363
*******************************************877765.......99**************************** PP
GRAS 342 rkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +++gy++ ee+g+l lgWkd +L+++SaW+
Rsa1.0_00350.1_g00007.1 364 GMLPWNGYTLVEENGTLRLGWKDLSLLTASAWQ 396
********************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MASKRVHRDH TDLSTVKRHK DLDFPENTTT TTPDAINLLS LLLQCAEYVA TNHLHEASIL 60 LSEISETCSP FGSSPERVVA YFSQALQARV VSTYLSRACS HLSNNPPIHH PHKIFAALQT 120 FNSLSPLIKF SHFTANQAIF QALNGEEDSV HIIDLDVMQG LQWPGLFHIL ASRPRKLRSI 180 RITGFGPSSD ILASTGRRLA DFAASLSLPF EFHPVVGKIG KTDPSRLGTR PGEAVVVHWM 240 QHRLYDVTGS DLDAVEVIRG LRPSLVTMVE QELSCDDGGG CFLGRFVEAL HYYSALFDAL 300 GDGLGEESGE RFAVEQIVLA TEIRNIVGEK KRGMMRWREE LSRVGFRPVS LRGNPATQAG 360 LLLGMLPWNG YTLVEENGTL RLGWKDLSLL TASAWQSQPS D
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |