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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_00104.1_g00053.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
Nin-like |
Protein Properties |
Length: 283aa MW: 32521.8 Da PI: 5.9556 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_00104.1_g00053.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 75 | 8.9e-24 | 117 | 166 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
k +s e++s+yF+ pi++AA eL+v+lT+LKr+CR++G +RWPhRk+ sl
Rsa1.0_00104.1_g00053.1 117 KALSKETISRYFYVPITQAAMELDVGLTLLKRRCRELGFRRWPHRKLMSL 166
789********************************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MADHKLKEER PFSFLTYSPS FDDHISLTFP SFEWEEELLP LHNNFVSQSF HLPTITLPLP 60 DLESLSQDVL NTYSSTEQNR GEGDLEKNTK KRKLNIEEHS VGIISDITTY TNFPGSKALS 120 KETISRYFYV PITQAAMELD VGLTLLKRRC RELGFRRWPH RKLMSLLALI NNVKERQKMD 180 GGENTGIFKN AVEILEDERR RIEENPDLEF TDKTKRLRQA CFKATHKMKK KKRSLKSEMS 240 IIPSSSSSGS VVSEEESVIE GIESDDEEVK YLLCGFTSEF SGL
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC189574 | 1e-104 | AC189574.2 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH011B08, complete sequence. |