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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Prupe.I004500.1.p |
Common Name | PRUPE_ppa002472mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family |
GRAS |
Protein Properties |
Length: 679aa MW: 76744.6 Da PI: 6.5952 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Prupe.I004500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 392.9 | 3.5e-120 | 305 | 676 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
+lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+ + y+ l + + s +e l+a+++f+ sP+ ++
Prupe.I004500.1.p 305 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDANQRLAHYFADGLEARLAGARTPSYSFLVSMQIS---AAEILKAYEVFVTSSPFKTV 393
579***************************************************999999999999998...9******************* PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
sh++aN++Il+ +e+++r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g +e++eetg+rL+k+Ae+++vpfe+nv +a
Prupe.I004500.1.p 394 SHFLANKTILKLAEKATRLHVIDFGISYGFQWPCFIQHLSKRPGGPPKLRITAIELPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IA 484
***********************************************************9****************************9.7* PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
+++e++++e+L+++++E+++Vn++ +l++++de+v ++s+rd vLkl+k+++P+++++ + +ns+ F++rf eal ++salfd +ea++
Prupe.I004500.1.p 485 QKWETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPNLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASV 576
******************************************************************************************** PP
GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
pre+e r + E+ + gr+i nvvaceg er+er et+++W+ r +aGFk++p++++ k++k++l+ ++ + +r++e+ +++++gWk+r+
Prupe.I004500.1.p 577 PREDERRLMFEKYVYGRDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPVDQELLKKMKRILKFMGyHNDFRIDEDGHWILQGWKGRT 668
*******************************************************************9999999****************** PP
GRAS 367 LvsvSaWr 374
++++S+W+
Prupe.I004500.1.p 669 ILALSFWK 676
*******8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 679 aa
Download sequence Send
to blast |
MGSIQVNQES TSPVCLSTNL DHLSDSNTSL SSGSDGDAID ISEYNHPVIK YISDILEEDL 60 EGKPCMLQDC LALQAAEKSF YDVLNQNDHP SPKQPPLSVH QSFENSDDDS PHSCHSSNGS 120 IAVKTNWVFD RSEASHVQSS LVQSLSDAGL VSDSLSEMQS LGHFGGLGEA SKFLPNVKLE 180 GYRLMLPGLD QWPSSTNILM TTPDNDGYKS TNGSKGKKNN QREDADYPEE GRSNKQPVAF 240 ADDSEPQEMF DEVLLCHGNH EFESCSPDES LITVGSGKLQ RNKQKGSKTA RSKKQNNNWE 300 LVDLSTLLTQ CAQAVASYDQ RTASELLKQI RQHSSPYGDA NQRLAHYFAD GLEARLAGAR 360 TPSYSFLVSM QISAAEILKA YEVFVTSSPF KTVSHFLANK TILKLAEKAT RLHVIDFGIS 420 YGFQWPCFIQ HLSKRPGGPP KLRITAIELP QPGFRPTERV EETGRRLKKY AERFNVPFEY 480 NVIAQKWETI QFEDLKIDRN EVIVVNCMNR LKHIPDETVM VNSPRDIVLK LIKKINPNLF 540 IHGVVNGTYN SPFFVTRFRE ALFHFSALFD VFEASVPRED ERRLMFEKYV YGRDILNVVA 600 CEGLERVERP ETYKQWQVRN VRAGFKQLPV DQELLKKMKR ILKFMGYHND FRIDEDGHWI 660 LQGWKGRTIL ALSFWKKA*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |