PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.7G228600.1.p

Common Name

PRUPE_ppa008116mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 362aa MW: 42571.6 Da PI: 4.5893

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.7G228600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.2	1.2e-14	122	206	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++ v +L+e+ ++ +l+r++l+ +W+ev++k+ ++ ++er+ +qC++ ++ l+++ykk+ke ++ +ss+++yf++++ Prupe.7G228600.1.p 122 WTEHAVFVLLEVWGDRFLQLGRKSLRSEDWREVAEKVsEASKIERTDTQCRSMLDMLKRKYKKEKEKVEEM-GLNSSKWAYFKKMD 206 ***********************************777899*******************99996.89999******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	9.8E-20	120	208	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MDDMDDDTRY HSKAYSLNHH NSSGRRKINI RNTQYSRPIA NRYAEEDDDE LDEFDEGNGR 60 QDHDEEEEEE HPRGLHRNFD ADDGFERHTK KRKVKNLESN YEFAPRVRVP YRDPSSRGEE 120 DWTEHAVFVL LEVWGDRFLQ LGRKSLRSED WREVAEKVSE ASKIERTDTQ CRSMLDMLKR 180 KYKKEKEKVE EMGLNSSKWA YFKKMDMLMA SSLRQECGLA CGVDSGEYVF MNTRVYLERS 240 NGFDEMRDSP GESETDEDED GNDDQDAFPP RMGMRGVDRG EEGSSYRVLA DSIHKFGEIY 300 EKIESSKRQQ MRELEKMRKD FHKELEFQKK QILERAQVEI AKIQEADDDD ETDVSAEDLS 360 E*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MDDMDDDTRY HSKAYSLNHH NSSGRRKINI RNTQYSRPIA NRYAEEDDDE LDEFDEGNGR  60
QDHDEEEEEE HPRGLHRNFD ADDGFERHTK KRKVKNLESN YEFAPRVRVP YRDPSSRGEE  120
DWTEHAVFVL LEVWGDRFLQ LGRKSLRSED WREVAEKVSE ASKIERTDTQ CRSMLDMLKR  180
KYKKEKEKVE EMGLNSSKWA YFKKMDMLMA SSLRQECGLA CGVDSGEYVF MNTRVYLERS  240
NGFDEMRDSP GESETDEDED GNDDQDAFPP RMGMRGVDRG EEGSSYRVLA DSIHKFGEIY  300
EKIESSKRQQ MRELEKMRKD FHKELEFQKK QILERAQVEI AKIQEADDDD ETDVSAEDLS  360
E*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	186	KRKYKKEKE

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppe.5324	0.0	fruit

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.7G228600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020423772.1	0.0	trihelix transcription factor ASIL2
Refseq	XP_020423773.1	0.0	trihelix transcription factor ASIL2
TrEMBL	A0A251NFI8	0.0	A0A251NFI8_PRUPE; Uncharacterized protein
STRING	XP_008242605.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2441	34	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-82	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Prupe.7G228600.1.p
Entrez Gene	18771098