PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G014400.1.p | ||||||||
Common Name | PRUPE_ppa002384mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 683aa MW: 77380 Da PI: 5.5367 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.6 | 2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd Prupe.3G014400.1.p 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKD 95 79****************************.99***************6434555777********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl Prupe.3G014400.1.p 96 RKVNS-QTRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 133 *****.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.88E-64 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.691 | 6 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.4E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 683 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GIRTDWVMHE YRLDERECET AQGLQVQDAY ALCRIFKKSA TGPKIGEHYG STSTTNYQLT 180 SDHSSSVELY SDGGRCEDFE SSSYPMQMNA CSSSPNFVHT SSLDMARKRD GKWTQFLSKD 240 AFNCSSSFSS FPNHGNVPYP PSKVDIALEC ARLQHRLSLP PLEVEDFPQV GINDFKTMQY 300 SNPAVEPTST ETDALQEILS VAHVSQEMIN QSSNLADQTW GGNYAAPAND FSFIVDRDAH 360 YNQIADHMNS MRYVDKSWEN PYTRPIDIGD LEDDFRMENT AENLRWVGIS DKYLEKSFME 420 ENKVVPLENI SGFRREEQEH EVQVAGETGD QSGMIKEFND SETNDDFSLG FINEDPNDNF 480 LNDGTMDDYS PSPSFEVIEE IQVNHGMFVS TRQVAETFFH QLMPSQTVKV HLNPVLGHNV 540 FVERVDTQTK CENIGSFFES FKAFGMDKFV GVSKSTKPWR KFASTLVCAV TLLLMHIIYF 600 GQHVEDEKLM DAFTTTTTAA IVEEKGNSTV SKKKRLGLIK WSNKEEKVCL VNIRGGNSCS 660 VLLKKIGVFL TVSLALCTMW AL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-56 | 2 | 158 | 11 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00212 | DAP | Transfer from AT1G65910 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G014400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC151822 | 6e-46 | AC151822.29 Medicago truncatula clone mth2-32h21, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020414575.1 | 0.0 | NAC domain-containing protein 86 isoform X1 | ||||
TrEMBL | A0A251PWQ6 | 0.0 | A0A251PWQ6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ16200 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4421 | 34 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-166 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G014400.1.p |
Entrez Gene | 18782146 |