PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 462aa MW: 53884.4 Da PI: 7.9348 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 140.8 | 8.1e-44 | 14 | 140 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +p+GfrFhPtdeelv++yLkkk++g + +++++i+e+di+k+ePwdLp + +k+++++w+fFs+ + ++++knr+t++g+Wk tg++ Prupe.2G202900.1.p 14 VPVGFRFHPTDEELVTHYLKKKLKGMDSHVSNIIREIDILKFEPWDLPeRsLLKSDDENWFFFSRPEY---NKHKKNRTTQEGFWKITGRE 101 599***************************99***************953467788899***999876...4579**************** PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++++++ +++++g k++L+fy+gr +++e+t+Wvmhey Prupe.2G202900.1.p 102 HQIKARdSRSVIGRKRILTFYRGRVRSSERTNWVMHEYY 140 ****99666779**************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.07E-47 | 7 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 50.15 | 14 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-25 | 15 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MIVISRAAED DLSVPVGFRF HPTDEELVTH YLKKKLKGMD SHVSNIIREI DILKFEPWDL 60 PERSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGFWKITGR EHQIKARDSR SVIGRKRILT 120 FYRGRVRSSE RTNWVMHEYY IPNDNPNAQR DFVLCRLKKN VKKSDENADV AATCDEGETH 180 NASDVENQQV NDMNMEDNRP PENLDYFERE RDRLLANSLS NNDHNAFPTE FSANDQEFLR 240 TLIVEPQSRE TSDTDREPVY HQSLQMRCEP QIPYELLQYG SSQSRRDTDV ILHNQLSRQA 300 SSSVNVASKA GTYQREHRPQ QQSGPIIVFR DTSADEYYTR EKTRRITYPP EKFGFLLQPK 360 EPEKPKPKPE KPKEPPYPRT AADFPPKQIS ITKSSIDKKV PQGSMEQTQN RTTPRNWKGS 420 FITWQTSPLT SPPSVYIFNT VLGAILFLFC VREVVLYGEW C* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-31 | 6 | 160 | 7 | 170 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218468.2 | 0.0 | NAC domain-containing protein 100 isoform X3 | ||||
TrEMBL | A0A251QM12 | 0.0 | A0A251QM12_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244176.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13478 | 5 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 7e-44 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202900.1.p |