PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G148100.1.p
Common NamePRUPE_ppa021277mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRF
Protein Properties Length: 445aa    MW: 47925.7 Da    PI: 9.8062
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G148100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC70.91.5e-22111156146
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46 
                         d epgrCrRtDGKkWRC ++v++++k+C+ H+hrgr+rsrk++e+s
  Prupe.2G148100.1.p 111 DHEPGRCRRTDGKKWRCNKNVVPDQKYCQQHMHRGRQRSRKPVENS 156
                         679***************************************9985 PP
2WRC67.12.4e-21324366244
                 WRC   2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                          epgrCrRtDGKkWRC+r+vl+++k+C  H+hrg +r+ k ++
  Prupe.2G148100.1.p 324 LEPGRCRRTDGKKWRCRRDVLPDQKYCGQHIHRGAKRQMKDVQ 366
                         59************************************99875 PP
3QLQ56.86.6e-204680337
                 QLQ  3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                        +Ta+Ql++L++Q+l+yK++aan+PvP +L+++i+k
  Prupe.2G148100.1.p 46 LTASQLHELEQQALIYKHFAANLPVPFHLVLPIWK 80
                        7********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009514.3E-114480IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166622.14580IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088803.8E-134679IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.545111155IPR014977WRC domain
PfamPF088791.5E-19113154IPR014977WRC domain
PROSITE profilePS5166721.972323367IPR014977WRC domain
PfamPF088792.3E-18325365IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MTMEEEGGGK VKLGLGIGVD CYGDDHNGTE EVVVGKKKKK YGGGGLTASQ LHELEQQALI  60
YKHFAANLPV PFHLVLPIWK SVAASFGSSN AAAINRQYPS WFSATGFDYR DHEPGRCRRT  120
DGKKWRCNKN VVPDQKYCQQ HMHRGRQRSR KPVENSEVAS PSSTKTPKNS EIELGNSKTN  180
LQISTPKGLQ LMAQSYNYVS VSQGTTMASS GYHECKKNIR PVTTTSIANI PANRSATSTN  240
PAAVATTTIA GPTTTTNSST NENSLNIGVK YNSSNHAGGN CMIRGSSMNV VNISPGLGFS  300
PKSVLQALLG CNGLYFDNGS GVELEPGRCR RTDGKKWRCR RDVLPDQKYC GQHIHRGAKR  360
QMKDVQPVAV PSSSAAAMNT TRLSRTTAIC RKTNCAIPNT NLSISIPANP PPGRNDERIN  420
SSSDSDTTLT DTSLTACDSS HVSS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G148100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020413419.10.0growth-regulating factor 9 isoform X2
TrEMBLA0A251QG680.0A0A251QG68_PRUPE; Uncharacterized protein
STRINGXP_008232696.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF92282022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45480.11e-42growth-regulating factor 9