PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G086500.1.p | ||||||||
Common Name | PRUPE_ppa026265mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 566aa MW: 64165.4 Da PI: 6.6402 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 94.9 | 7.5e-30 | 118 | 203 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+ ++++++++++k+plW+evs+ m +e+g++rs k+Ckek+enl k+ykk+keg+ +r ++ +++++f+qlea Prupe.2G086500.1.p 118 RWPRQETLTLLEIRSGLDSKFKETNQKGPLWDEVSRIMgEEHGYQRSGKKCKEKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 203 8*************************************99******************************98..55667*******85 PP | |||||||
2 | trihelix | 54.4 | 3.3e-17 | 415 | 496 | 1 | 81 |
trihelix 1 rWtkqevlaLiearr.emeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt++ev Lie+ r ++e + ++ g+ k++lWee+++km g++rs +Ckek+en++ + + ++e +kk++++++ y Prupe.2G086500.1.p 415 RWTEHEVASLIELIRtSLELTTQDcGCFKEGLWEEIAAKMGCLGYRRSVGECKEKLENMSVYPRMTAECNKKHKQDAKA-NMY 496 8***********766155555554689*********************************************9655543.333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 7.7 | 115 | 178 | IPR001005 | SANT/Myb domain |
CDD | cd12203 | 7.16E-23 | 117 | 183 | No hit | No description |
Pfam | PF13837 | 9.8E-20 | 118 | 204 | No hit | No description |
PROSITE profile | PS50090 | 6.4 | 118 | 176 | IPR017877 | Myb-like domain |
PROSITE profile | PS50090 | 6.388 | 408 | 474 | IPR017877 | Myb-like domain |
SMART | SM00717 | 0.14 | 412 | 476 | IPR001005 | SANT/Myb domain |
Pfam | PF13837 | 2.8E-11 | 414 | 487 | No hit | No description |
CDD | cd12203 | 2.13E-16 | 414 | 480 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence Send to blast |
MDEYGVPDLR QLMASRTQFC TTSQFQEPFS AHGNLTAQPN YQPMLVPAGG LVDHLHPPHY 60 STIINGCGAA HPPNNNAAAT TSSAAALYGI DLEHGHGWNN NINVGMNAAD GGNNMNYRWP 120 RQETLTLLEI RSGLDSKFKE TNQKGPLWDE VSRIMGEEHG YQRSGKKCKE KFENLYKYYK 180 KTKEGKAGRQ DGKHYRFFRQ LEAIYGDQTS NQSSTYGRLN PLLYHHTTPN DTVNPKNQEV 240 VQDQKHISCE SLSFSNNSTE FDQTSSSENN DDDLSISAID YFMMNQSMGS LKNEKQTCAR 300 PVNKKSWKAK VEDFVNSQIG KVINTQEAWM EKMLKSIEHR EEERIAQEEE WRKQQAAKFD 360 REVHEFWAKE RAWVESRDAA IMEALGTFSR PGISNHDKDK DDISKLQIPN DTINRWTEHE 420 VASLIELIRT SLELTTQDCG CFKEGLWEEI AAKMGCLGYR RSVGECKEKL ENMSVYPRMT 480 AECNKKHKQD AKANMYHGQL SCYEGQQEVS KRRPDGMGLQ LMDGGLSPSS SNMDVSSSSF 540 HVQFNGGENL WDRYGTVKLG KGKNQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G086500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412174.1 | 0.0 | trihelix transcription factor PTL | ||||
TrEMBL | A0A251QGG9 | 0.0 | A0A251QGG9_PRUPE; Uncharacterized protein | ||||
STRING | EMJ21251 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2022 | 34 | 89 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 4e-83 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G086500.1.p |
Entrez Gene | 18786715 |