PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G432900.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 274aa MW: 29782.1 Da PI: 6.9817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G432900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	2e-12	70	117	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f+ L llP++ K +K++i+ + v+YIksL+ Prupe.1G432900.1.p 70 MHTWTERERRKKMRDMFSSLHALLPQL----PAKADKSTIVDESVRYIKSLE 117 57788*******************6....39***************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.316	66	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.64E-14	68	126	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.56E-13	71	121	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.9E-15	71	131	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.0E-9	71	117	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	7.3E-9	74	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd04873	0.00202	196	230	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009793	Biological Process	embryo development ending in seed dormancy
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MSCLQQNSVL GSPNSNLGTC GGGELLKLEK MGMNVNSYLN SSSALMEKGV IKESTGKAAS 60 GGGNESEHGM HTWTERERRK KMRDMFSSLH ALLPQLPAKA DKSTIVDESV RYIKSLEKTL 120 QTKQKQKLDK LQSTSALIAS NTELAGETRE AFLADLLHPS KNLMVTNAFP ASLSPACFET 180 WFSPTVVVNI CGPDAQFSVC SPRKPGLLTT ILYILEKHEL DVVSAHVSSD QYRCMYMIHA 240 HAGGACDHFP EALSVEDTFK LAAGEINLWL LSC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G432900.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021820237.1	0.0	transcription factor bHLH95-like
TrEMBL	A0A251RC84	0.0	A0A251RC84_PRUPE; Uncharacterized protein
STRING	XP_008220349.1	1e-163	(Prunus mume)
STRING	EMJ27976	1e-171	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4773	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	7e-40	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G432900.1.p