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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G107700.1 |
Common Name | POPTR_0014s10330g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
NAC |
Protein Properties |
Length: 246aa MW: 28503.5 Da PI: 4.6175 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G107700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 143.9 | 8.7e-45 | 7 | 136 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkd 89
p+G+ FhPtdeelv++yL+ k++g ++ ++i+e++++++ePw Lp+ ++k+ ++ e+yfF++r+ kya+++r+nr+t++gyWk tgkd
Potri.014G107700.1 7 PVGYGFHPTDEELVTYYLRFKMHGGYEQEVSIIAEANVCDYEPWVLPElsAIKEpNDPECYFFCPRSYKYANSDRANRTTQAGYWKVTGKD 97
79***********************9888899**************953444443555********************************* PP
NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
+ v++k ++e++ +kktLvfy+gr p+g kt+W+mhey+
Potri.014G107700.1 98 RIVKTKtTKEHIATKKTLVFYEGRVPNGIKTNWIMHEYH 136
***99877888***************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
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MNSRPPPVGY GFHPTDEELV TYYLRFKMHG GYEQEVSIIA EANVCDYEPW VLPELSAIKE 60 PNDPECYFFC PRSYKYANSD RANRTTQAGY WKVTGKDRIV KTKTTKEHIA TKKTLVFYEG 120 RVPNGIKTNW IMHEYHPNFS FPNQREFVLC KLKKDPDAIM PTYEEGEASF NVTSDHFENQ 180 NPTEYNHPQT FEEGEYGAWT ASNFTNDEPE DDTYQFQAQL DSLRGYDEGC YSLDSALKFP 240 YGDIY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swm_B | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swm_C | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swm_D | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swp_A | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swp_B | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swp_C | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
3swp_D | 6e-35 | 7 | 154 | 21 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Induced during normal senescence. {ECO:0000269|PubMed:18443413}. |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers (PubMed:17158162). Expressed in guard cells (PubMed:18443413). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:18443413}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}. |