PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.011G125600.1
Common NamePOPTR_0011s12790g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family NZZ/SPL
Protein Properties Length: 324aa    MW: 35441.5 Da    PI: 8.3542
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.011G125600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE246.8e-0862154177
              NOZZLE   4 slffmstdqnsvrnpnellrntrlvvnssgeirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatv..gd.... 88 
                         slf+m  ++n  +  + +   t+     +   r  t   + ++p +  + q +kk   rgmgva+le  +i+e  k ++ a++  g     
  Potri.011G125600.1   6 SLFLMPNNDNKQEPTQTMAISTKP----AEPARRSTATNQSKRPTTSKC-QTRKKQCQRGMGVAQLESLRIQERWKAITEANQniGAlnlq 91 
                         566666655554333333333333....334555666667777876655.55677789***************999996654411431111 PP

              NOZZLE  89 .tssv.......aai..sntatrlpvpvdrgvvlqgfps.......................slgssrilcggvgsgqvmidpvis...pw 143
                          t  +         +  +n+  ++   v+rgv                                g +     g gsgqv+++p +    p 
  Potri.011G125600.1  92 pTQQLhdhypsnYNTdnNNQMLQYGTTVNRGVP-----MssnggvfngflgwdhqggvvvkrVDGFNVNNNDGFGSGQVFVNPYLVgsvPV 177
                         122111111000111002222334444555543.....24455566777779988877777433447777889999999999965312355 PP

              NOZZLE 144 gfvetsa....tthelssisnpqmynassnnrcdtcfk 177
                           v + a    +++elssi++   ++     rcd cfk
  Potri.011G125600.1 178 HQVGAPApvfeASKELSSIPKVMQHQQYEPSRCDLCFK 215
                         555554422224679******9999999999******9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087445.1E-537215IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MATPLSLFLM PNNDNKQEPT QTMAISTKPA EPARRSTATN QSKRPTTSKC QTRKKQCQRG  60
MGVAQLESLR IQERWKAITE ANQNIGALNL QPTQQLHDHY PSNYNTDNNN QMLQYGTTVN  120
RGVPMSSNGG VFNGFLGWDH QGGVVVKRVD GFNVNNNDGF GSGQVFVNPY LVGSVPVHQV  180
GAPAPVFEAS KELSSIPKVM QHQQYEPSRC DLCFKMGGFS ARAARSAPYA NHNHNNNEGT  240
SEVMAVHRKG NNPLGRNVIM EYEFFPGKNG ENTCFKEMEF PPPEASVAVG TGEAFCVTTY  300
SDYSGYSASN ASNSIDLSLK LSY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.011G125600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2164490.0AC216449.1 Populus trichocarpa clone POP006-O09, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002316937.10.0uncharacterized protein LOC7460862
RefseqXP_024467442.10.0uncharacterized protein LOC112329130
TrEMBLB9I0200.0B9I020_POPTR; Uncharacterized protein
STRINGPOPTR_0011s12790.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83651723
Representative plantOGRP1001058