PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G160400.1
Common NamePHAVU_008G160400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 179aa    MW: 19962.4 Da    PI: 9.96
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G160400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.2e-06136161630
                         HHHHHHHHHHHHHHHHHHHCTSCC.C CS
                 HLH   6 nerErrRRdriNsafeeLrellPk.a 30 
                         n + ++RR+ri +++ +L+el+P+ +
  Phvul.008G160400.1 136 NVAAKNRRERISERLKTLQELVPNgS 161
                         7889*******************944 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.58E-6128162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-5129161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.94130178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.28E-4132159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MQGSGSFLSF QQSWLFSQES NLHEGCDQWN HVSPKSTTHM RLVQNFSCSE IATCYSSMFK  60
GAKEKQQHGE SSSSGWLYSE PHAHSDSLNE SAAQDLVLRK RSFMGETMQA ANVKKPCTTT  120
SKATKPKSSP PKDPQNVAAK NRRERISERL KTLQELVPNG SKVHWPLKTR NTMGAYLI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G160400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141017.11e-132hypothetical protein PHAVU_008G160400g
TrEMBLV7B9611e-131V7B961_PHAVU; Uncharacterized protein
STRINGXP_007141017.11e-131(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49373253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.12e-15RHD SIX-LIKE 1