PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G224600.1
Common NamePHAVU_007G224600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family Trihelix
Protein Properties Length: 474aa    MW: 54549.6 Da    PI: 6.8008
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G224600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.22.2e-23104200186
            trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcp 80 
                         +Wt+ +v++Li a+ +++++ +++           +kk++W++vs++m+e+g  +sp+qC++k+++lnkryk+++++ +k+ +++++++  
  Phvul.007G224600.1 104 KWTDTMVRLLIMAVYYIGDEGGSEGtdkkkslgmlQKKGKWKSVSRAMMEKGSYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQN 194
                         7**************99999996433557788899**********************************************5599999999 PP

            trihelix  81 yfdqle 86 
                         +++ +e
  Phvul.007G224600.1 195 LLETME 200
                         999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.7E-21102225No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MLFPLFNYSI KGAGMFSGMV GVDNSLQPQQ QQNPHHLQHH PQMVPYAPHH DTDPHHPHHN  60
QSIKQGYPPY SSAKTKQQQH SGLSDEDDDT SDPKKKVSLW QRMKWTDTMV RLLIMAVYYI  120
GDEGGSEGTD KKKSLGMLQK KGKWKSVSRA MMEKGSYVSP QQCEDKFNDL NKRYKRVNDI  180
LGKGTACRVV ENQNLLETME LSPKMKEEVK KLLNSKHLFF REMCAYHNSC GHVNNNPPQQ  240
GETGGDVPQS QAQLHQQQPQ QQQPQQQQQQ QPCFHSSEVE NLGASGVEGL RMLKVGNGEE  300
NDDDSDEEED SEDDSDEEED DSGEGGSRGN VGHGHENMED DNDGRSMRKR ARKVREVPVS  360
PLMMQQLSAE VSGVFQDGGR SAWDKKQWMR SRILQLEEQQ ISYQSQSFEL EKQRLKWARF  420
SSKKEREMKR AKLENERRRL ENERMVLLIR QKEFELMSLQ HQQKHQQQQH SST*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G224600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145268.10.0hypothetical protein PHAVU_007G224600g
TrEMBLV7BHE40.0V7BHE4_PHAVU; Uncharacterized protein
STRINGXP_007145268.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48203457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.13e-70sequence-specific DNA binding transcription factors