PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G187400.1
Common NamePHAVU_007G187400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 454aa    MW: 48586.1 Da    PI: 6.0221
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G187400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.11.4e-16249304358
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                         + kr rr+ +NRe+ArrsR+RK+a +  Le+ v +L +eN++L k+l   ++++++
  Phvul.007G187400.1 249 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSE 304
                         689******************************************99999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-13246302No hitNo description
SMARTSM003382.6E-19247311IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415249304IPR004827Basic-leucine zipper domain
PfamPF001702.4E-14250303IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.82E-12251301No hitNo description
CDDcd147024.72E-7252303No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
PfamPF124985.8E-45318442IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MPRGSRFVQP RPSSPSFASH HTQSNDMDRV FSVDEISDHF WPSPPIPVSA ADEASKMSRS  60
ASEWAFQRFL QEASAPSPPS PSSAATAAPA APSDVVLVEI DDHPKPAPAP PLNAAVLPNT  120
PAPVPLDSDE YQAFLKSKLN LACAAVAMTR ASLAKSQEPI PFVDGGSQPI DPSQVGSQTT  180
SKASIPSGND PSNLQDKDTN VPVGMPSIPS MQKKPVVAVR PSTSGSSREL SDDEDAEGET  240
SMNDMDPADA KRVRRMLSNR ESARRSRRRK QAHLTDLETQ VSQLRGENST LLKRLTDVSQ  300
KYSESAVDNR VLKADVETLR AKVKMAEETV KRITGLNPMV HAMADMSSLG MPLFDGRSPS  360
DTSADAAVPV QDDHHQFYQP TSNNPIPNHD PIVNDGLGGI SSIENVQQNS TEVVGGNKMG  420
QTTSLQRVAS LEHLQKRIRG GVDSCGPPSN GKQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263270RRSRRRKQ
2265270SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G187400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2466650.0AB246665.1 Glycine max SBZ1 mRNA for bZIP protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007144827.10.0hypothetical protein PHAVU_007G187400g
SwissprotQ990901e-121CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLV7BJR60.0V7BJR6_PHAVU; Uncharacterized protein
STRINGXP_007144827.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.28e-69bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]