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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G173500.1 |
Common Name | PHAVU_006G173500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 354aa MW: 38026.3 Da PI: 5.3894 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G173500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.9 | 1.3e-18 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a+++a+++l+g+
Phvul.006G173500.1 21 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARALRGA 71
689******.7*********....4456*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MGAMNDGNRS RKKSSSRGHH RFVGVRQRPS GRWVAEIKDS LQKVRLWLGT FDTAEDAARA 60 YDNAARALRG ANARTNFELP EATSGDASKR GDGGGSTFVP DCSEPFSFED VNEPGEEAEG 120 LLGALKAKLF DGKKGKFHFP FLTNSAASPV VHSGLVSRST QNICSAEKGL LLPSSPNKTV 180 LSSMNGTGAN PLLGVTSTLA TSNTCANSVV IPNHDHEGSV ARSFRVDTHQ LCQTPPDATW 240 FNEVAYELPW PTQFMSQVPD NSSLIASAGT LAWPLSGVTE STIDMACPDQ GSSSSNKSGQ 300 MMNMVNMQLP LVGDATEGIW TLEQQQFVQC ENNSWFSYNG SWDPLLYIPS ELA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |