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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G111800.1 |
Common Name | PHAVU_005G111800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 461aa MW: 51434.9 Da PI: 6.5016 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G111800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 281.8 | 2e-86 | 52 | 444 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPi 90
++lLl+cA a++s+d +laq++++ l++ asp gd++qRl++ f++AL +r +r +++ ++ +++ + + +++++l ++++ P+
Phvul.005G111800.1 52 EKLLLHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTI----QRRLMSVTELagYVDLIPW 138
689***************************************************77766643322222....333334444466******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfef 178
++f++ + N+ I++a+ g +rvH++Df+i++++QWp++++ La+ pegppslRiT+ ++ + +++e+g rL +fA+ +vpfef
Phvul.005G111800.1 139 HRFGYCASNNEIYKAITGYQRVHVLDFSITHCMQWPTFIDGLAKSPEGPPSLRITVPFCRPHVpplVNVSIHEVGLRLGNFAKFRDVPFEF 229
*******************************************************9555334468999*********************** PP
GRAS 179 nvl...................vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqead 247
nv+ + l+ l++ +L+++++Eal++n++ l +l d++ +++ rd++L+l+k+l+P++v +v++++d
Phvul.005G111800.1 230 NVIgntgpltpaelsdestsfhFEAMLSLLNPATLNLREDEALVINCQNWLRYLSDDRKGSRQslsLRDAFLNLIKGLNPRIVLLVDEDCD 320
*************99999998555689999************************9987665555779************************ PP
GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
++ +s+ r++ ++++ + fd+le+ lp++s +r+ E +g++i+n+++ eg +r+er e + ++r++++G+ +vp+ ++++ ++k
Phvul.005G111800.1 321 LSVSSLTSRITTCFNHLWIPFDALETFLPKDSGQRTEFESD-IGQKIENIISFEGHQRIERLECGVQMSQRMKNVGYLSVPFCDETVREVK 410
*****************************************.************************************************* PP
GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
ll +++ g+ ++ e+g lvl+Wk+++ v+++aW
Phvul.005G111800.1 411 GLLDEHA-SGWGMKREEGMLVLTWKGNSCVFATAW 444
*******.8899*********************** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 461 aa
Download sequence Send
to blast |
MQVTSSHSHM KAELKGTSIS FQNPTTLFNT PHNPLSGALK GCLGSLDGAC IEKLLLHCAS 60 ALESNDITLA QQVMWVLNNV ASPVGDTNQR LTSWFLRALI SRASRICPTA MSFKGSNTIQ 120 RRLMSVTELA GYVDLIPWHR FGYCASNNEI YKAITGYQRV HVLDFSITHC MQWPTFIDGL 180 AKSPEGPPSL RITVPFCRPH VPPLVNVSIH EVGLRLGNFA KFRDVPFEFN VIGNTGPLTP 240 AELSDESTSF HFEAMLSLLN PATLNLREDE ALVINCQNWL RYLSDDRKGS RQSLSLRDAF 300 LNLIKGLNPR IVLLVDEDCD LSVSSLTSRI TTCFNHLWIP FDALETFLPK DSGQRTEFES 360 DIGQKIENII SFEGHQRIER LECGVQMSQR MKNVGYLSVP FCDETVREVK GLLDEHASGW 420 GMKREEGMLV LTWKGNSCVF ATAWVPCEMR DHIGMDASLP *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |