PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G009000.1
Common NamePHAVU_001G009000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 561aa    MW: 61646 Da    PI: 7.0558
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G009000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-11403461563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR++A rs +RK  +i eLe kv++L++e ++L  +  +l+   ++lkse+
  Phvul.001G009000.1 403 KRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSEN 461
                         9********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-14399463IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955401464IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.5E-11403459No hitNo description
SuperFamilySSF579594.08E-10403458No hitNo description
PfamPF001701.7E-10403461IPR004827Basic-leucine zipper domain
CDDcd147031.90E-13404476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MTRRVESMEG VDQSNMKRNG CVFGSSSGAN LRPPNRLNNA VAISQMGVAE NQKPYGIPPS  60
YPNTNISPSS PYPQFFGSQS HSNSVSQRLG SPNLSSASSH SRSLSQPPFF SLDSLPPLSP  120
SPYREPSLSD PISTDVSAEE SLVNPHAPLP NRGPALQLGH SLPPRKGHRR SSSDSPLGIS  180
DFIQSAPQLV PSRTWSDRDG SRGGNSGYEK PIQLVLKEPI KDMDRADGFG VEPMVGRKED  240
DALDDLFSAY MNLDNIDGLN FSGMEDKDLD SRTSGSKTVE SSDNEVESHA NGKTTGAQGA  300
SSSCSEERRE GVKRSSDGDI APGSRHRRSF SLDSSIGNFH IGDESPKLPP LQNRGGQHSP  360
SNSMDGKTSE TSIEFGNGEF SSEELKKIKE NDKLAEIAMA DPKRAKRILA NRLSAARSKE  420
RKMRYISELE LKVQTLQTET TTLSTQFTKL QMDNSELKSE NNEYKLRIQA FEQQSQLKDA  480
LNETLDAEVR RLRRMVAELG GETLLSSRMA QQLAISQQMF PLQQHQQHPN QLRHAQLHNN  540
HSQEQTQTQS QRQNGKATAY *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G009000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007160692.10.0hypothetical protein PHAVU_001G009000g
TrEMBLV7CUX10.0V7CUX1_PHAVU; Uncharacterized protein
STRINGXP_007160692.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.37e-68bZIP family protein