PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf05179g00027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 156aa    MW: 17581.7 Da    PI: 5.4707
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf05179g00027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.2e-101443130
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                              rg W++eEde+l+++++ +G g+W+++++ 
  Peinf101Scf05179g00027.1 14 RGLWSPEEDEKLIKYITTYGHGCWSSVPKL 43
                              788************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-14643IPR009057Homeodomain-like
SuperFamilySSF466891.22E-8943IPR009057Homeodomain-like
PROSITE profilePS512949.59955IPR017930Myb domain
SMARTSM007170.00651354IPR001005SANT/Myb domain
PfamPF002497.1E-81443IPR001005SANT/Myb domain
CDDcd001674.51E-71742No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MGHHSCCNKQ KVKRGLWSPE EDEKLIKYIT TYGHGCWSSV PKLAVDQMNN VNEDLNANSM  60
APSLIPFSFD SMPNDPSWFF NYPHSQHDLD YKQDNSNSIV SSNISLNYID AIGGVLMDSR  120
NDPIKSSTHQ DLLMVPNLLP RLSPPAPLQQ NFDSMV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795891.13e-28PREDICTED: myb-related protein 308 isoform X1
RefseqXP_009795898.12e-28PREDICTED: transcription factor MYB86 isoform X2
RefseqXP_016479067.13e-28PREDICTED: transcription factor MYB26-like isoform X1
RefseqXP_016479068.12e-28PREDICTED: transcription factor MYB26-like isoform X2
TrEMBLA0A1S4AQP06e-27A0A1S4AQP0_TOBAC; transcription factor MYB26-like isoform X1
TrEMBLA0A1S4ARE65e-27A0A1S4ARE6_TOBAC; transcription factor MYB26-like isoform X2
TrEMBLA0A1U7XYA05e-27A0A1U7XYA0_NICSY; transcription factor MYB86 isoform X2
TrEMBLA0A1U7Y1Q86e-27A0A1U7Y1Q8_NICSY; myb-related protein 308 isoform X1
STRINGXP_009795891.11e-27(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1740934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.27e-25myb domain protein 26