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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Peinf101Scf04017g00030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
MYB |
| Protein Properties |
Length: 310aa MW: 34341.4 Da PI: 8.8842 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf04017g00030.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 30 | 1.2e-09 | 24 | 71 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
W+ eE++ + +a++++ ++ W++Ia+ ++ +t ++k ++q +
Peinf101Scf04017g00030.1 24 VWSREEEKAFENAIAMHFTEdsneVWDKIASLVP-SKTMDELKRHYQLL 71
7*****************99**************.***********965 PP
|
| 2 | Myb_DNA-binding | 38.9 | 2.1e-12 | 146 | 190 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky
Peinf101Scf04017g00030.1 146 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 190
7*****************************99************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
EKKNSNYQEN KSRNMSTSNL STVVWSREEE KAFENAIAMH FTEDSNEVWD KIASLVPSKT 60
MDELKRHYQL LVDDVNDIEA GLVPVPKYIG EESSSSTKES NLGYSVDRRS NCGYANGFSG 120
TIHNEPIGQS GKGGSRSEQE RRKGIPWTEE EHRLFLLGLD KFGKGDWRSI SRNFVISRTP 180
TQVASHAQKY FIRLNSMNRD RRRSSIHDIT SINNGDVATH QPPITGQQAT SNPSNPAALG 240
PSVKHRNQPN MHSMGMYGGA PMGHPVAAPP SHMAAAVGTP VMLPPGHHHH PPYVLPVAYP 300
MPPPPQPPMH
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters. Derepresses strongly the sugar-repressed transcription of promoters containing SRS or 5'-TATCCA-3' elements. Functions with GAMYB to integrate diverse nutrient starvation and gibberellin (GA) signaling pathways during germination of grains. Sugar, nitrogen and phosphate starvation signals converge and interconnect with GA to promote the co-nuclear import of MYBS1 and GAMYB, resulting in the expression of a large set of GA-inducible hydrolases, transporters, and regulators that are essential for mobilization of nutrient reserves in the endosperm to support seedling growth (PubMed:22773748). {ECO:0000269|PubMed:12172034, ECO:0000269|PubMed:22773748}. |
| UniProt | Transcription activator that binds to 5'-TATCCA-3' elements in gene promoters. Derepress strongly the sugar-repressed transcription of promoters containing SRS or 5'-TATCCA-3' elements. {ECO:0000250|UniProtKB:Q8LH59}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by sucrose and gibberellic acid (GA). {ECO:0000269|PubMed:12172034}. |
