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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf03438g00029.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
MYB_related |
Protein Properties |
Length: 250aa MW: 28012.9 Da PI: 4.7909 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf03438g00029.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 43.7 | 6.6e-14 | 14 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd lv +v+++G+g+W++ ++ + t++++k++w+++l
Peinf101Scf03438g00029.1 14 KGPWTPEEDIMLVSYVQEHGPGNWRA----VP-NSTDNDIKNYWNTHL 56
79************************....55.5566********996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MGRPPCCDKI GVKKGPWTPE EDIMLVSYVQ EHGPGNWRAV PNSTDNDIKN YWNTHLKKKL 60 KKLEAASCGS DLYSKDSCLS SLSSTSKGQW ERTLQADINT AKLALQNALS LEKPSAIQEY 120 MATDVKPKNI CYPYIKQEGN NSTSTYASSA ENIAKLLKQW TKSSSSTNNS ENSKGSSSTQ 180 LSCNYNNATN DFESISNFES FEQSKSDQFS QATTPEESKF YGESKRELDD QVPLSVMLEN 240 WLFDENEDLF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF737850 | 0.0 | JF737850.1 Petunia exserta isolate exse205 CAPS marker MYB60 genomic sequence. |