PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf02279g03007.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bHLH

Protein Properties

Length: 299aa MW: 32691.8 Da PI: 7.3259

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf02279g03007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.2	1.1e-06	95	133	4	33
HHHHHHHHHHHHHHHHHHHHHCTSCC.C........... CS HLH 4 ahnerErrRRdriNsafeeLrellPk.as........ka 33 +h Er RR+++++ f++L llP+ ++ k Peinf101Scf02279g03007.1 95 MHIWTERERRKKMRNMFSNLHALLPQlPPktlqntlqKL 133 56678*********************5535554444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.05E-7	93	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.31E-6	94	135	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.6E-5	95	135	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	7.5E-6	218	276	No hit	No description
SuperFamily	SSF55021	7.08E-6	220	271	No hit	No description
PROSITE profile	PS51671	9.132	222	299	IPR002912	ACT domain
CDD	cd04873	6.98E-6	223	261	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008152	Biological Process	metabolic process
GO:0016597	Molecular Function	amino acid binding
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MDEGGGDCFI WENQGWSFMN SDNLGGNGEK LADKLPDTSN GQQVVAPNAA KGIEVAGPST 60 GRKRSAPGKN GVKENGEANE GKVNGGVGGE SDHEMHIWTE RERRKKMRNM FSNLHALLPQ 120 LPPKTLQNTL QKLQRQKLER LHGMAITMNP SIITSQKLGA LDHSKISREA YLADQGSTNN 180 NAISPTNNNA ANNSLLIPHF PAVFQTWTSP NVILNVSGEE AHISVCCPKK PGLFSTICYV 240 LEKHKIEVVS AQISSNQHRS MYMIQAHASG SADQFSETFP VEEIYKQAAG EIMLWVTSQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC237586	9e-34	AC237586.1 Populus trichocarpa clone POP031-J10, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019251521.1	1e-168	PREDICTED: transcription factor bHLH95-like
TrEMBL	A0A1J6INZ6	1e-166	A0A1J6INZ6_NICAT; Transcription factor bhlh95
STRING	XP_009800782.1	1e-164	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1324	23	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	5e-35	bHLH family protein