PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01969g05034.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 461aa    MW: 51786.1 Da    PI: 7.28
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01969g05034.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.8e-31225281259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                DgynWrKYGqK+vk se+prsYY+Ct+++Cpvkkkver+  d++++eitY+g+Hnhe
  Peinf101Scf01969g05034.1 225 YDGYNWRKYGQKKVKASECPRSYYKCTHPKCPVKKKVERAV-DGHITEITYSGQHNHE 281
                               59***************************************.***************7 PP
2WRKY107.94.9e-34392450159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDgy+WrKYGqK+vkg+++prsYYrCt++gC+v+k+ver+++dpk+v++tYeg+Hnh+
  Peinf101Scf01969g05034.1 392 LDDGYKWRKYGQKVVKGNQHPRSYYRCTFPGCNVRKQVERASTDPKAVITTYEGKHNHD 450
                               59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-28221283IPR003657WRKY domain
SuperFamilySSF1182902.62E-24223283IPR003657WRKY domain
SMARTSM007748.0E-34224282IPR003657WRKY domain
PfamPF031061.1E-23226281IPR003657WRKY domain
PROSITE profilePS5081122.94226283IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-36378452IPR003657WRKY domain
SuperFamilySSF1182906.67E-30384452IPR003657WRKY domain
PROSITE profilePS5081136.013387452IPR003657WRKY domain
SMARTSM007746.9E-40392451IPR003657WRKY domain
PfamPF031061.3E-26393450IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MNETMRTSTI SAITIPPRPS YESFFNDMSC FSPGPMSLVS SFLQSPNYYD CSSFSQLLAG  60
AVASSPLVKP TILPEDEKNS GYKQNRPMNL VLAQSPLFMI PPGLSPSAES FLITLVIYGI  120
SISMQSPFGM SHQQALAHVT AQAALSQSYR QMQTEDQCSS QVSAEMLGRE LSTEPKVSSL  180
QLKVEPLQNR LDNEPSDEQD IKFELPEVSQ SDNKPSYSAL DKPAYDGYNW RKYGQKKVKA  240
SECPRSYYKC THPKCPVKKK VERAVDGHIT EITYSGQHNH ELPQPSKQRK DGPTLDFTDS  300
SDDKPDTRIH DWTVMTSLDG SSPSRSDQVS TQMASEFMTK ECDETKIIAI DERYDEPNAK  360
RMKAAVETLA PSHGTVAESK IVLQTRSEVD FLDDGYKWRK YGQKVVKGNQ HPRSYYRCTF  420
PGCNVRKQVE RASTDPKAVI TTYEGKHNHD IPTVRNRNSQ R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-37226452877Probable WRKY transcription factor 4
2lex_A5e-37226452877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768533.10.0PREDICTED: probable WRKY transcription factor 3
RefseqXP_016436720.10.0PREDICTED: probable WRKY transcription factor 3
TrEMBLA0A0P0UVE60.0A0A0P0UVE6_NICBE; Transcription factor
STRINGXP_009603130.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43142344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-113WRKY DNA-binding protein 4