PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01853g04024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 278aa    MW: 31455.9 Da    PI: 10.3139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01853g04024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.2e-15107153354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h + ErrRR+++N+ f++Lr+llP++     +K +Ka++L  ++eYI+sL
  Peinf101Scf01853g04024.1 107 VNHMISERRRREKLNDNFQQLRSLLPPS-----TKKDKASVLATTTEYISSL 153
                               58999*********************99.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-18104174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.872104153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.76E-13104158No hitNo description
PfamPF000105.5E-13107153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-18108171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-14110159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MSSSPQFPKT EGEDAAIRRA YLAVISSPSS SSSPSQIQGN LPRDYRLATQ KATAFRRFRS  60
TLGPSAPIAT RTCKQNMFKR SIIFFRNINM IRRQEHIQMN CPTSTQVNHM ISERRRREKL  120
NDNFQQLRSL LPPSTKKDKA SVLATTTEYI SSLKAQVEEL GKKNEILEAQ LLAPSYNQHG  180
DESFSSGESG KLAVQITNII TESISGERII ELQVIVKEQC NILDMVIHLL EFLKNVNNVS  240
LEWMQTNSRN VQSGSVTLIT LRLRIQNIWE MNGTNLLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112117ERRRRE
2113118RRRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016480568.14e-94PREDICTED: putative transcription factor bHLH041
RefseqXP_016506510.18e-94PREDICTED: putative transcription factor bHLH041
TrEMBLA0A1S4AVP49e-93A0A1S4AVP4_TOBAC; putative transcription factor bHLH041
TrEMBLA0A1S4CZB52e-92A0A1S4CZB5_TOBAC; putative transcription factor bHLH041
STRINGXP_009793632.16e-91(Nicotiana sylvestris)
STRINGXP_009624851.14e-91(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-33bHLH family protein