PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01836g01009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 292aa    MW: 32861.8 Da    PI: 6.9628
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01836g01009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.85.2e-181464146
                              TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqk 46
                              +g+WT+eEd++l+ +++++G g      +W++Ia++++  Rt++++k++w++
  Peinf101Scf01836g01009.1 14 KGPWTPEEDQKLLSCIEEHGCGclsllyRWSAIAAYLP-SRTDNEIKNYWNS 64
                              79************************************.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.83E-16575IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.4E-24970IPR009057Homeodomain-like
PROSITE profilePS5129421.884970IPR017930Myb domain
SMARTSM007177.3E-141368IPR001005SANT/Myb domain
PfamPF002492.3E-171464IPR001005SANT/Myb domain
CDDcd001672.44E-141666No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MGKSKCCDKE GLKKGPWTPE EDQKLLSCIE EHGCGCLSLL YRWSAIAAYL PSRTDNEIKN  60
YWNSRLKKKL TKMGIDPMTH KPKTDNGNSS QSKYVANLSH MAQWESARLE AEARLVRRSK  120
DSKMLFNNTH NYNQITSQPY YQLPCLDILK AWQRSSTKPT TNDINAMLLD GNFASRNKNL  180
ESSIPTTSNN FSGSVVMNNV ITTTTTTTTT TVGDNLPLSA INCLDQDLCP SNFMQEFSEL  240
FPEYNICAQN SENYSSGQLD NFMGGCSLDF EDNKYFSWNN FSHLVTSPVG SP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009621431.11e-123PREDICTED: protein ODORANT1-like
TrEMBLA0A1S4ACH71e-120A0A1S4ACH7_TOBAC; protein ODORANT1-like
TrEMBLA0A1U7XKL31e-120A0A1U7XKL3_NICSY; protein ODORANT1-like
STRINGXP_009621431.11e-123(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.14e-38myb domain protein 16