PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01452g04008.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Trihelix

Protein Properties

Length: 982aa MW: 110560 Da PI: 7.1987

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01452g04008.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.5	4e-09	209	268	14	73
trihelix 14 rremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 ++ +++ +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++ Peinf101Scf01452g04008.1 209 TTTSGQQHGRGKTRADKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGADR 268 5566778889999******************************************98633 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	5.35E-16	782	964	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	6.0E-7	823	927	No hit	No description
CDD	cd00180	3.95E-15	830	965	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence Send to blast
MDENKGETTK KQQQTQQHLS NSPDDNPDQD SPDNIPQQQQ QPQQVVVSGS FYIPTTSVSF 60 EQQQLQQQQQ FEVVNPKRPR YTASQWKFLP SSSSQQQQQQ KPSTTQVNIL STESSPISQT 120 QAQPHMSTAA SSSDTTSSPS HSPRPTASGQ ETSKPEGGGG GGGEQVHQQF RKGKYVSPVW 180 KPNEMLWLAR AWKTQYQGEG DMRGEVSITT TSGQQHGRGK TRADKDREVA EFLNRHGVNR 240 DAKTAGTKWD NMLGEFRKVY EWERGADREQ FGKSYFRLSP YERKKHRLPA SFDEEVFEEL 300 SQFMGPRMRT PQTRGGIGSQ SDDIRTALTI TKSLPPPPPF REDELTLSAR TKQFVMPSGT 360 EALLHGTRGG FLGFETTSIL DIGGPSSSSS KELRRIGKIR MIWEESVSLW AEEGEHHRGR 420 VKLQGSSFLN ADEIAFLDDS MVACTMEAFE DGPMKGFSVD RFLSGVQLKV FGRRKSSSAT 480 VPSGPNERLQ LPSSEFPIRS TTIPWEFQDP TEYYVGCLRS PPPTLPSLFE LSWHLQQPPP 540 EELRFPLRRD VFKDLPQGKE LFFTTSNELL DCRGITYEVL SSIMRSNPSL SSSTATDRDS 600 YIGLWDDCIN RIISKFCSIE MVFVRKSSLS SLAENVQDQW PHVTAFLRNF CLWRGEETDQ 660 LREGQLDPSS SIVEKLLWTY MDLPYVLGYY AVGYIVTFCA LSRSQDRIIR TDLYTVDLST 720 PVERLKALVP CWRIAGLLPL LADRCFHYMS SNGSSFKNLP YSDFERIDLG NGNFIEMTPN 780 TVVKYFSSKR KFVAVKEIYD FLDRRIPHAE FIVKASDKDM ALVFKPRGCK FKPVNCDQLI 840 EALMQVTKAL VALHDLSFMH RDLGWDKVMR RSDRENEWLI TGFDEAVTAP QINPHGGGAA 900 AASGRHAPEM GRSLHTVKVD VWGVGQLVKS CGLVGVPKLL RELQNRCLDH NPEQRPTAAD 960 CYHHLLQLQS TMSAAAAGGG GY

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence Send to blast

MDENKGETTK KQQQTQQHLS NSPDDNPDQD SPDNIPQQQQ QPQQVVVSGS FYIPTTSVSF  60
EQQQLQQQQQ FEVVNPKRPR YTASQWKFLP SSSSQQQQQQ KPSTTQVNIL STESSPISQT  120
QAQPHMSTAA SSSDTTSSPS HSPRPTASGQ ETSKPEGGGG GGGEQVHQQF RKGKYVSPVW  180
KPNEMLWLAR AWKTQYQGEG DMRGEVSITT TSGQQHGRGK TRADKDREVA EFLNRHGVNR  240
DAKTAGTKWD NMLGEFRKVY EWERGADREQ FGKSYFRLSP YERKKHRLPA SFDEEVFEEL  300
SQFMGPRMRT PQTRGGIGSQ SDDIRTALTI TKSLPPPPPF REDELTLSAR TKQFVMPSGT  360
EALLHGTRGG FLGFETTSIL DIGGPSSSSS KELRRIGKIR MIWEESVSLW AEEGEHHRGR  420
VKLQGSSFLN ADEIAFLDDS MVACTMEAFE DGPMKGFSVD RFLSGVQLKV FGRRKSSSAT  480
VPSGPNERLQ LPSSEFPIRS TTIPWEFQDP TEYYVGCLRS PPPTLPSLFE LSWHLQQPPP  540
EELRFPLRRD VFKDLPQGKE LFFTTSNELL DCRGITYEVL SSIMRSNPSL SSSTATDRDS  600
YIGLWDDCIN RIISKFCSIE MVFVRKSSLS SLAENVQDQW PHVTAFLRNF CLWRGEETDQ  660
LREGQLDPSS SIVEKLLWTY MDLPYVLGYY AVGYIVTFCA LSRSQDRIIR TDLYTVDLST  720
PVERLKALVP CWRIAGLLPL LADRCFHYMS SNGSSFKNLP YSDFERIDLG NGNFIEMTPN  780
TVVKYFSSKR KFVAVKEIYD FLDRRIPHAE FIVKASDKDM ALVFKPRGCK FKPVNCDQLI  840
EALMQVTKAL VALHDLSFMH RDLGWDKVMR RSDRENEWLI TGFDEAVTAP QINPHGGGAA  900
AASGRHAPEM GRSLHTVKVD VWGVGQLVKS CGLVGVPKLL RELQNRCLDH NPEQRPTAAD  960
CYHHLLQLQS TMSAAAAGGG GY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009775235.1	0.0	PREDICTED: uncharacterized protein LOC104225161
TrEMBL	A0A2G3CVZ1	0.0	A0A2G3CVZ1_CAPCH; Uncharacterized protein
STRING	XP_009775235.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12936	14	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-09	Trihelix family protein