PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf01347g02016.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

G2-like

Protein Properties

Length: 366aa MW: 41689.9 Da PI: 6.9824

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01347g02016.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.8e-31	79	132	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ++R+ Peinf101Scf01347g02016.1 79 PRLRWTPELHLRFVHAVERLGGQDRATPKLVLQLMGIKGLSIAHVKSHLQMFRS 132 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.897	75	135	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.5E-29	75	133	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.97E-15	76	134	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.6E-22	79	134	IPR006447	Myb domain, plants
Pfam	PF00249	1.5E-9	80	130	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence Send to blast
MNGGSNREEY SNLSPKNQIE SEEETEEEEE EEKEDDEETE ENNSKPKGTR TSSSNSTVEE 60 SGKKTNSGNV RQYVRSKTPR LRWTPELHLR FVHAVERLGG QDRATPKLVL QLMGIKGLSI 120 AHVKSHLQMF RSKKTDDPNQ ISTDGRFLLE NGDHHIFNLS QLPRLQGFNQ TSTSSLRYGD 180 ALWNRQPNSM YNPYMNNGGA SSISTTRHGF TSHINIGHSS HGQLFPWKTL DIEKNQNRPQ 240 YNFPNQRLWQ GQMGTSSSKQ NLLMTLPINR DRDRDRKGWM STEEAAGTTK TTTNKRKIQD 300 SEINLDLNLS LKTRREEDDH KRLKAEEVGN LLSLSLFSST TSVDQENHDG GEKNTRIMAS 360 TLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence Send to blast

MNGGSNREEY SNLSPKNQIE SEEETEEEEE EEKEDDEETE ENNSKPKGTR TSSSNSTVEE  60
SGKKTNSGNV RQYVRSKTPR LRWTPELHLR FVHAVERLGG QDRATPKLVL QLMGIKGLSI  120
AHVKSHLQMF RSKKTDDPNQ ISTDGRFLLE NGDHHIFNLS QLPRLQGFNQ TSTSSLRYGD  180
ALWNRQPNSM YNPYMNNGGA SSISTTRHGF TSHINIGHSS HGQLFPWKTL DIEKNQNRPQ  240
YNFPNQRLWQ GQMGTSSSKQ NLLMTLPINR DRDRDRKGWM STEEAAGTTK TTTNKRKIQD  300
SEINLDLNLS LKTRREEDDH KRLKAEEVGN LLSLSLFSST TSVDQENHDG GEKNTRIMAS  360
TLDLTL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	3e-16	80	134	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-16	80	134	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-16	80	134	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-16	80	134	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975445	1e-42	HG975445.1 Solanum pennellii chromosome ch06, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009791664.1	1e-157	PREDICTED: uncharacterized protein LOC104238869 isoform X2
TrEMBL	A0A1U7XXG3	1e-156	A0A1U7XXG3_NICSY; uncharacterized protein LOC104238869 isoform X2
STRING	XP_009791663.1	1e-154	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8573	21	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-50	G2-like family protein