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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf01199g04008.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
Family |
MYB_related |
Protein Properties |
Length: 256aa MW: 28848.6 Da PI: 4.2754 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf01199g04008.1 | genome | SGN | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 36.3 | 1.3e-11 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32
+g+WT+eEd++l+d++k++G g+W+t ++ g
Peinf101Scf01199g04008.1 14 KGPWTPEEDQKLIDYIKEHGYGNWRTLPKNAG 45
79*************************99887 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIK EHGYGNWRTL PKNAGHVQPL VNPEVLRLAT 60 SLLSSQRQNS NFLMPNNVQE NQICISQVQN QVHPMVQVTS QVQNPIQNIP TCTTLSTTPS 120 VPFYDDARLM EQFSSNLVNS SSQNCQVNEW QSSGMASNLT DQDYFNNPLQ NYGYYHELDQ 180 SIRDPPLSDA STFQSNDSNN FSFQSVLSNL STPSSSPTPL NSNSTTTEDE RDNSYCSNML 240 NFDNIPNIWD STNEFM
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975441 | 1e-51 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |