PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Peinf101Scf01064g01019.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 145aa MW: 16239.6 Da PI: 4.1332

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf01064g01019.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	14	42	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+W +eEde+l+ v+ lG ++W++ a+ Peinf101Scf01064g01019.1 14 KGSWHEEEDERLASIVAILGERRWDALAK 42 799**********************9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.7E-8	8	43	IPR009057	Homeodomain-like
PROSITE profile	PS50090	6.992	9	54	IPR017877	Myb-like domain
SuperFamily	SSF46689	3.02E-5	11	43	IPR009057	Homeodomain-like
Pfam	PF00249	2.6E-6	14	42	IPR001005	SANT/Myb domain
CDD	cd00167	5.94E-4	16	42	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
MAFQLIMQEE ELRKGSWHEE EDERLASIVA ILGERRWDAL AKASECCGSN TSKSGQISSA 60 SKSDSINAPN NSTGDSISGK DDCSSADSNE TGLSDWIPSW SYEQSQMEHH MYLCRLNLCF 120 CHPQCFSEDN NISTWDDTSS SIWEQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016444726.1	5e-35	PREDICTED: transcription factor MYB48-like
TrEMBL	A0A1S3XXP8	1e-33	A0A1S3XXP8_TOBAC; transcription factor MYB48-like
STRING	XP_009625011.1	5e-35	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12	24	2154

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-10	myb domain protein 27