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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00911g05013.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
MYB |
Protein Properties |
Length: 280aa MW: 32279.3 Da PI: 8.4911 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00911g05013.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.9 | 2.1e-17 | 101 | 146 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++
Peinf101Scf00911g05013.1 101 RGHWRPHEDAKLKELVAQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 146
899*****************************.***********996 PP
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2 | Myb_DNA-binding | 56.7 | 5.7e-18 | 153 | 196 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l+ a+k++G++ W+ Iar ++ gRt++ +k++w+
Peinf101Scf00911g05013.1 153 RRAFSEEEEERLLTAHKMYGNK-WAMIARLFP-GRTDNAVKNHWHV 196
678*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
IFNLDLFCLV LEKRESLTHY STVASCDFQE MNFLTQHSLV MDYNKGRECL NNGSIDGKVL 60 ENPWIFHSMV EDEKGTKLNV ETEEVDLVGR KNNGGTKLCA RGHWRPHEDA KLKELVAQYG 120 PQNWNLIAEK LEGRSGKSCR LRWFNQLDPR INRRAFSEEE EERLLTAHKM YGNKWAMIAR 180 LFPGRTDNAV KNHWHVIMAR KHREQNSVYR RRKPSNMQQF HSMGFPRVSG SDNAIQSNNL 240 NSDSTISSTN NNMDEHCAST CTDLSLTPSS SKASQEMNKR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975522 | 1e-79 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |