PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00665g17027.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 334aa    MW: 37815.7 Da    PI: 7.7486
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00665g17027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY352.8e-11170190222
                               --SS-EEEEEEE--TT-SS-E CS
                      WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                               +Dgy+WrKYGqK vk+s+fpr
  Peinf101Scf00665g17027.1 170 EDGYRWRKYGQKAVKNSPFPR 190
                               8*******************9 PP
2WRKY51.71.8e-162112502059
                               S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               + rsYYrCts++C+vkk+vers +dp+vv++tYeg+Hnh+
  Peinf101Scf00665g17027.1 211 YCRSYYRCTSQKCSVKKRVERSYQDPSVVITTYEGQHNHH 250
                               68*************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-31154252IPR003657WRKY domain
SuperFamilySSF1182901.44E-9161211IPR003657WRKY domain
PROSITE profilePS5081126.05164252IPR003657WRKY domain
SMARTSM007741.7E-33169251IPR003657WRKY domain
PfamPF031061.6E-7170192IPR003657WRKY domain
SuperFamilySSF1182902.09E-13207252IPR003657WRKY domain
PfamPF031061.0E-11210250IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MSDNNPFYHD YMGTGGTNNA FPFFGDQNPS SIYDPNIQNN HHQDFDPSSY MTLTECLQGS  60
MDYNSLSNAF GMSCSSSEVV CPPLLDQESS RKNSGDNPLT PSSLVSSSSS EAGGEEDSSK  120
SKKDLQAKDQ CEDEEDKSKK VVSKAKKKGE KKQKEPRFAF MTKSEIDNLE DGYRWRKYGQ  180
KAVKNSPFPR YLAKRISQRN QSNENAFSYY YCRSYYRCTS QKCSVKKRVE RSYQDPSVVI  240
TTYEGQHNHH CPATLRGNAA AAIFSPSFLS SSQLIPNFPQ ELVSQMLITN TNNQNLPINS  300
AYNYYHQQQQ PQLAPDQYGL FQDVVASLMH KRQP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-211622531078Probable WRKY transcription factor 4
2lex_A1e-211622531078Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009776873.11e-157PREDICTED: probable WRKY transcription factor 71
RefseqXP_016455219.11e-157PREDICTED: probable WRKY transcription factor 71
TrEMBLA0A1S3YSL81e-156A0A1S3YSL8_TOBAC; probable WRKY transcription factor 71
TrEMBLA0A1U7WDY31e-156A0A1U7WDY3_NICSY; probable WRKY transcription factor 71
STRINGXP_009776873.11e-156(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14852475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.18e-38WRKY DNA-binding protein 71