 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Scf00657g04007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
MYB_related |
| Protein Properties |
Length: 249aa MW: 27450.5 Da PI: 4.3599 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Scf00657g04007.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 34.9 | 3.5e-11 | 14 | 43 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30
+g+WT+eEd++lvd+++++G g+W++ ++
Peinf101Scf00657g04007.1 14 KGPWTPEEDKKLVDYIEKHGHGSWRALPKL 43
79***********************98876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MGRSPCCDEN GLKKGPWTPE EDKKLVDYIE KHGHGSWRAL PKLAEAAQVA KLQYLQWLFQ 60
SSSSNSNNYP IATSLNTTQY SNLGDFGPFN LSNSIKEGTP SINLSLLENQ TLFSNENSGS 120
QLLHNPDTSL PLPDTQEVPF NFQAHLNNNN NNNNNNNNNN NNNNNNNNNN NTSGDNGQDF 180
NFEICSPSSP LNNIIHSPPS SSRLPPLTEI SISNNQGDAS STNSSNAAEG TSSYWPELFF 240
EDNFMHEIA
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CU914755 | 5e-41 | CU914755.2 S.lycopersicum DNA sequence from clone LE_HBa-178P3 on chromosome 4, complete sequence. |
| GenBank | HG975443 | 5e-41 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |
| GenBank | HG975516 | 5e-41 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
