PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

ERF

Protein Properties

Length: 130aa MW: 14473 Da PI: 7.9411

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00577g02007.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.1	2.5e-14	32	75	2	49
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 +y+GVr ++ +g+++AeIrdp + +++++lg+ + ++eAaka++ a Peinf101Scf00577g02007.1 32 HYSGVRKRP-WGKFAAEIRDPGD---KTHVWLGTIDMPDEAAKAYDTA 75 69*****.******944...5*****************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	17.82	32	92	IPR001471	AP2/ERF domain
CDD	cd00018	6.82E-17	32	80	No hit	No description
SuperFamily	SSF54171	7.85E-14	32	83	IPR016177	DNA-binding domain
Pfam	PF00847	7.8E-9	32	75	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	6.0E-21	32	82	IPR001471	AP2/ERF domain
SMART	SM00380	4.3E-17	32	94	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.9E-7	33	44	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.9E-7	55	71	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MPHGTAEGKR QVDGGMVVVT AAKRGRSSDE VHYSGVRKRP WGKFAAEIRD PGDKTHVWLG 60 TIDMPDEAAK AYDTATRLFR RGDQTADDAD FEHEQLSPDE RGSKYFRIWF LAGVVKGFHG 120 SNSQNHRGAD

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269\|PubMed:11487705}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009769627.1	1e-23	PREDICTED: ethylene-responsive transcription factor 8-like
Refseq	XP_016510115.1	1e-23	PREDICTED: ethylene-responsive transcription factor 8-like
Swissprot	Q9FE67	4e-21	ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBL	A0A1S4D9J6	3e-22	A0A1S4D9J6_TOBAC; ethylene-responsive transcription factor 8-like
TrEMBL	A0A1U7VP00	3e-22	A0A1U7VP00_NICSY; ethylene-responsive transcription factor 8-like
TrEMBL	R4WAQ7	3e-22	R4WAQ7_TOBAC; Ethylene response factor #230
STRING	XP_009769627.1	5e-23	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA21	24	1165

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44210.1	2e-23	erf domain protein 9

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Van den Broeck L, et al. From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress. Mol. Syst. Biol., 2017. 13(12): p. 961 [PMID:29269383] Li B, et al. Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470]