PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00384g00015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | bHLH | ||||||||
Protein Properties | Length: 320aa MW: 35459.6 Da PI: 7.6675 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.3 | 1.5e-09 | 161 | 208 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN ++ L++l+P + +k a++L + +++++sLq Peinf101Scf00384g00015.1 161 SHSLAERARREKINARMKLLQDLVPGC----NKISGTAMVLDEIINHVQSLQ 208 8*************************9....89999***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-15 | 155 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.48E-9 | 155 | 212 | No hit | No description |
PROSITE profile | PS50888 | 14.659 | 157 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.5E-16 | 157 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.8E-7 | 161 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.4E-9 | 163 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MESTQVRSAS CGRKIQETAT TGNSFTALLE LPPNQAMQLL VQHSEEMDSA KLYNTPPLIF 60 PSDAALIDRA SKFSVFAAGN SSSKSQFVKQ ELVDDSDSNP NSSPAFSNPT VTQKNPKRKE 120 REKKGKESSK KSKKVANDTS EDREKLPYVH VRARRGQATD SHSLAERARR EKINARMKLL 180 QDLVPGCNKI SGTAMVLDEI INHVQSLQRQ VEFLSMRLAA VNPRVDSNLD TFFAAESGSA 240 VESNFPGIAA PSIWPEGQSS GNRTSQYQQL LNIDGFHQPV WVREEDNSSF LTPENSLLTY 300 DSSVNSASLH QNQLKMELQM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009780308.1 | 1e-160 | PREDICTED: transcription factor bHLH48-like isoform X2 | ||||
Refseq | XP_016505589.1 | 1e-160 | PREDICTED: transcription factor bHLH48-like isoform X2 | ||||
Swissprot | Q8VZ02 | 5e-78 | BH048_ARATH; Transcription factor bHLH48 | ||||
TrEMBL | A0A1S4CX42 | 1e-158 | A0A1S4CX42_TOBAC; transcription factor bHLH48-like isoform X2 | ||||
TrEMBL | A0A1U7WP00 | 1e-158 | A0A1U7WP00_NICSY; transcription factor bHLH48-like isoform X2 | ||||
STRING | XP_009780303.1 | 1e-157 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4029 | 23 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57800.2 | 2e-78 | bHLH family protein |
Publications ? help Back to Top | |||
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