PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf00175g19009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | NAC | ||||||||
Protein Properties | Length: 373aa MW: 42310 Da PI: 5.443 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.5 | 1.1e-18 | 2 | 131 | 4 | 127 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 G rFhPtd el+ yLkk ++ ++++ + i+ +iy Pw++ ++++++ yfF++ +kk++++k+k+++ Peinf101Scf00175g19009.1 2 GERFHPTDVELI-SYLKKFLKCEPISSKCPIQPGEIYGEqPPWQIF-GASHQHQVRYFFTPLKKKKKKKKKKKKKknhkrfirtC 84 88**********.9************9767*****9976268***6.555566777****9888888666555543455555546 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +g+ k + + +++s k+ ++g k+++v+ + ++p+ ++ W+m+ey Peinf101Scf00175g19009.1 85 GNGTLKGQTSGDPIKS-KEIVIGFKRSFVYENTQEPT-QHKGWLMKEYF 131 6999999999999*99.9999*********9777776.8899******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.425 | 1 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.12E-19 | 2 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-13 | 2 | 130 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MGERFHPTDV ELISYLKKFL KCEPISSKCP IQPGEIYGEQ PPWQIFGASH QHQVRYFFTP 60 LKKKKKKKKK KKKKKNHKRF IRTCGNGTLK GQTSGDPIKS KEIVIGFKRS FVYENTQEPT 120 QHKGWLMKEY FVGDDFFGEN NISKQDDFVI CRIKKNTKEK HVEDEALSTV LVEEDISTAS 180 HNLSSSSFEG GSDHNGFIIN KVPEQASAEV QHSESMVTED TNTTSTTFEL EAYGQQAFTT 240 GIEQGCGVDH HQYTSTSNKF SEVMNGVQDI FPNSYDQPWT GIEQAGHGAD HQTTNEFSET 300 ISGLEDRFLD KYGQPLFGIE QADNNIDFWK EMANGLTDIN VPEEWVTEVQ GWIAADQANE 360 TVELQTQQMG GEH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 78 | LKKKKKKKKKKKKKKNHKR |
2 | 61 | 74 | KKKKKKKKKKKKKK |
3 | 65 | 74 | KKKKKKKKKK |
4 | 66 | 74 | KKKKKKKKK |
5 | 68 | 74 | KKKKKKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 6e-12 | NAC domain containing protein 2 |