PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00175g19009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 373aa    MW: 42310 Da    PI: 5.443
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00175g19009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.51.1e-1821314127
                       NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                               G rFhPtd el+  yLkk ++ ++++ +  i+  +iy    Pw++   ++++++  yfF++ +kk++++k+k+++          
  Peinf101Scf00175g19009.1   2 GERFHPTDVELI-SYLKKFLKCEPISSKCPIQPGEIYGEqPPWQIF-GASHQHQVRYFFTPLKKKKKKKKKKKKKknhkrfirtC 84 
                               88**********.9************9767*****9976268***6.555566777****9888888666555543455555546 PP

                       NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                                +g+ k + +  +++s k+ ++g k+++v+ + ++p+ ++  W+m+ey 
  Peinf101Scf00175g19009.1  85 GNGTLKGQTSGDPIKS-KEIVIGFKRSFVYENTQEPT-QHKGWLMKEYF 131
                               6999999999999*99.9999*********9777776.8899******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.4251156IPR003441NAC domain
SuperFamilySSF1019411.12E-192155IPR003441NAC domain
PfamPF023653.7E-132130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MGERFHPTDV ELISYLKKFL KCEPISSKCP IQPGEIYGEQ PPWQIFGASH QHQVRYFFTP  60
LKKKKKKKKK KKKKKNHKRF IRTCGNGTLK GQTSGDPIKS KEIVIGFKRS FVYENTQEPT  120
QHKGWLMKEY FVGDDFFGEN NISKQDDFVI CRIKKNTKEK HVEDEALSTV LVEEDISTAS  180
HNLSSSSFEG GSDHNGFIIN KVPEQASAEV QHSESMVTED TNTTSTTFEL EAYGQQAFTT  240
GIEQGCGVDH HQYTSTSNKF SEVMNGVQDI FPNSYDQPWT GIEQAGHGAD HQTTNEFSET  300
ISGLEDRFLD KYGQPLFGIE QADNNIDFWK EMANGLTDIN VPEEWVTEVQ GWIAADQANE  360
TVELQTQQMG GEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16078LKKKKKKKKKKKKKKNHKR
26174KKKKKKKKKKKKKK
36574KKKKKKKKKK
46674KKKKKKKKK
56874KKKKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.16e-12NAC domain containing protein 2