PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00175g07024.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 571aa    MW: 64608.6 Da    PI: 5.793
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00175g07024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like833.3e-26176229155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k r+ Wtp++H++F++a++qL G+ekA+Pk+i+e+m+ +gLt+ehv+SHLQkYR+
  Peinf101Scf00175g07024.1 176 KRRVIWTPKMHQNFLRAIQQL-GHEKAVPKKIVEIMNEPGLTREHVASHLQKYRM 229
                               679******************.********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-26174233IPR009057Homeodomain-like
SuperFamilySSF466898.24E-18175233IPR009057Homeodomain-like
TIGRFAMsTIGR015577.6E-24176229IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MGTKSICILL VIDDFTCHNI VTDMLHNQTY EVLHVGKIMD TLNAIWERKS NLNLVLTNIH  60
RLNTNVMSPD DARYENQIQD CNVAAYVVNF SDTDEMNKLW QMALQKEKGR KAATNQEAND  120
EKNALSMPQN VTKSSTENTS SDDNDAEISA HDLKGKRKAF TEKNEENGEN RDIEKKRRVI  180
WTPKMHQNFL RAIQQLGHEK AVPKKIVEIM NEPGLTREHV ASHLQKYRMC LKRAQESLAA  240
TSIYDQILSN DAKDEYFQFQ PCLSSPNFIT SRGYSHSRQQ PFQTHFQQAT DGLGQNLRQP  300
QMVSIHELSS FQQQNSYLKF ANWRQTNNSG LIGQQFTSLP RLAHSSNFRV YGDKTKNMLF  360
SIQSGSANQP TNSNSGLDFI GFKLSKDGKS VHFGHKGSSC AVTSNNTYSG LCSSMSENYI  420
QQQQSSSPFL ETPIENTLIQ CSSAPSENFT FHHLQATLPS TQQHPSNSIS DQQSVLLFEN  480
ATNKISYQSL EMPANILGDL EDYSALLFGD EVSVPAQENC RNYDCRQQEY SAPDEINSFG  540
TEVDIIKSLL ETTENSSSQQ FWEGDTENEL H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A8e-17174233362ARR10-B
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155177KRKAFTEKNEENGENRDIEKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019223863.10.0PREDICTED: putative two-component response regulator ARR21
TrEMBLA0A1S4AV910.0A0A1S4AV91_TOBAC; two-component response regulator ARR12-like
STRINGXP_009598455.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36591620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.14e-29response regulator 1