PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

MYB_related

Protein Properties

Length: 231aa MW: 26463.1 Da PI: 9.1124

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00113g02010.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.4e-15	14	80	1	46
TSSS-HHHHHHHHHHHHHTTTT......................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................tWktIartmgkgRtlkqcksrwqk 46 +g+W +eEd ll ++++++G g +W++Ia +++ gRt++++k++w++ Peinf101Scf00113g02010.1 14 KGAWAEEEDILLRKCIEKYGEGkwhqvpvradyllikivsffftRWSLIAGRLP-GRTANDVKNYWNT 80 799*************************************************.*********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.724	9	86	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.9E-8	12	42	IPR009057	Homeodomain-like
SuperFamily	SSF46689	7.35E-14	13	78	IPR009057	Homeodomain-like
SMART	SM00717	1.6E-10	13	84	IPR001005	SANT/Myb domain
CDD	cd00167	2.29E-9	16	80	No hit	No description
Gene3D	G3DSA:1.10.10.60	4.9E-12	45	82	IPR009057	Homeodomain-like
Pfam	PF00249	1.4E-7	46	81	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MNTSVFTSSG VLRKGAWAEE EDILLRKCIE KYGEGKWHQV PVRADYLLIK IVSFFFTRWS 60 LIAGRLPGRT ANDVKNYWNT QLLRRSNFAP PQQHQRKCTK AIKIMAKNVI IRPQPRNLSK 120 LAKNNVSNYS TIHKDEHSKQ KMFIEKPTAA EVVSRDNNVE WWTNLLLDNC NGFEKAAPES 180 TSAVKNIESL LNEELLSTSI NGGTNYPMQE TGDMGWSDFS IDSDLWELLL Q

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269\|PubMed:15361138}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ428109	0.0	HQ428109.1 Petunia x hybrida cultivar W59 DEEP PURPLE gene, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019240653.1	8e-60	PREDICTED: transcription factor MYB113-like
Refseq	XP_019240654.1	8e-60	PREDICTED: transcription factor MYB113-like
Swissprot	Q9FNV9	6e-28	MY113_ARATH; Transcription factor MYB113
TrEMBL	E9N670	1e-153	E9N670_PETHY; DEEP PURPLE
STRING	XP_009626596.1	7e-57	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12	24	2154

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-30	myb domain protein 113

Publications ? help Back to Top
Li T, et al. Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis. Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83 [PMID:25450360] Mondal SK,Roy S Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis. J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601 [PMID:28490275]