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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Peinf101Scf00040g09006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family |
WRKY |
Protein Properties |
Length: 352aa MW: 39578.7 Da PI: 7.2835 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Peinf101Scf00040g09006.1 | genome | SGN | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 107.6 | 6.4e-34 | 188 | 245 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+vers +dp++v++tYeg+Hnh+
Peinf101Scf00040g09006.1 188 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCQVKKRVERSFQDPSIVITTYEGQHNHH 245
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MADELRNFYY HQPFQEDRHS FLYSQQRASS TSGDDSSFVQ NLHMLDPSCM SYGEYIHGSS 60 CDYSTSLGKP FGFSAPSPSS EAFSNSIKDH DDIKPAAVLH VDAHNNDSIG GGSETPVTPN 120 SSISSSSTEA AADDQDSNKT STKKDKQVKD NLEDGEDTSK NKAKKKGEKK QKPPKFAFMT 180 KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTSQKCQV KKRVERSFQD PSIVITTYEG 240 QHNHHLPATL RGNVARMLSP SMLLTPSPSN FHHQELIMPQ SFYGHGGSSA FGNPQSSMSM 300 YHQNLTPHHQ QLQLPPDYGL LQDMYETDIT TCFKYVNLST SKPQWKCLDG KE
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT827656 | 3e-62 | KT827656.1 Manihot esculenta WRKY transcription factor 81 mRNA, complete cds. |