PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00939g00120.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 329aa    MW: 37400.3 Da    PI: 6.1878
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00939g00120.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-13146192455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h ++Er+RR+++ ++f eL  +lP +     kK++Ka+iLe+A++++k+L+
  Peaxi162Scf00939g00120.1 146 DHIIAERKRREKLSQRFVELSAVLPGL-----KKVDKASILEQAIKHVKELE 192
                               699************************.....9****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.04142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-10146192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-16146205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.68E-12147196No hitNo description
SuperFamilySSF474595.63E-16147206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-13148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MPCEGEKLDD FTTQKSTVSE DQETRELSLS PNSNASSSYF NQESKRKVSK IDFSLLTPLE  60
NYPIGSKRPS NQPIMNNDIK SSSSPYLLSF SNVNSVPTSC KIEAVDEVYN LCDSDQKLFP  120
YLKTKSCYDQ KDNQAKKRIP SVDHQDHIIA ERKRREKLSQ RFVELSAVLP GLKKVDKASI  180
LEQAIKHVKE LEEKVQSLEE QEKASRFLQE SVTFVNKSQL EDDDNYSSSD ENNSHGSISD  240
DISADIEVRF SDKNVLIRIT CAKRTAFLLK IYNEIEKLHL TIVNSCMMPF GKHAIDVTIV  300
AQMDDNFCMN LKDLVKHVRM VTGRLLSQA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135154KKRIPSVDHQDHIIAERKRR
2150155ERKRRE
3151156RKRREK
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630109.11e-142PREDICTED: transcription factor bHLH18-like isoform X1
SwissprotQ9T0723e-49BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1S4DHT31e-140A0A1S4DHT3_TOBAC; transcription factor bHLH18-like
STRINGXP_009630109.11e-141(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA136021316
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-48bHLH family protein