PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00853g00433.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 356aa MW: 40095.3 Da PI: 9.3954

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00853g00433.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60	6e-19	34	126	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf..erspkqCkekwenlnkrykkikegekk....rtsessst 78 +W+++e+ aLi+a+re++ +lrrg+l++++W+ev++ + + ++ ++++qC++k+e+l+kry+ + +++ r+ + s+ Peaxi162Scf00853g00433.1 34 CWSHDETAALIDAYREKWYSLRRGNLRANHWQEVADDVfTRCPIdpPKTAVQCRHKMEKLRKRYRTEIQRAAPyggvRSHRYCSS 118 8***********************************7444444489***************99988764111135566678 PP trihelix 79 cpyfdqle 86 +++f++++ Peaxi162Scf00853g00433.1 119 WVHFKRMD 126 88898887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	4.5E-21	33	128	No hit	No description
PROSITE profile	PS50090	6.446	35	94	IPR017877	Myb-like domain
SMART	SM00595	7.9E-9	42	133	IPR006578	MADF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence Send to blast
METQNFSTTP PPRLPSPNNV TVAVSSSRRL PPPCWSHDET AALIDAYREK WYSLRRGNLR 60 ANHWQEVADD VFTRCPIDPP KTAVQCRHKM EKLRKRYRTE IQRAAPYGGV RSHRYCSSWV 120 HFKRMDDMEK GPNNDNVGSS DDEGDEDNVD DYRQNSIKLS NLYGNNNVVS STMNRSSSYQ 180 GVVSNGGGGF RIRIPGMPGI AAQTAAPLPM AKPYTNSRIE DTGVENPNNY YGSSNKMFRA 240 DIMGKRVVGE GGGGVGEKKG GDPMGEIVAA IKVLGDGFVR MERMKMDMAR ELEERRMEME 300 MKKTEMILES QQRIVEAFAQ ALSEKKHKKA KRMPTPECRQ DLKLNNALET DRIGLN

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence Send to blast

METQNFSTTP PPRLPSPNNV TVAVSSSRRL PPPCWSHDET AALIDAYREK WYSLRRGNLR  60
ANHWQEVADD VFTRCPIDPP KTAVQCRHKM EKLRKRYRTE IQRAAPYGGV RSHRYCSSWV  120
HFKRMDDMEK GPNNDNVGSS DDEGDEDNVD DYRQNSIKLS NLYGNNNVVS STMNRSSSYQ  180
GVVSNGGGGF RIRIPGMPGI AAQTAAPLPM AKPYTNSRIE DTGVENPNNY YGSSNKMFRA  240
DIMGKRVVGE GGGGVGEKKG GDPMGEIVAA IKVLGDGFVR MERMKMDMAR ELEERRMEME  300
MKKTEMILES QQRIVEAFAQ ALSEKKHKKA KRMPTPECRQ DLKLNNALET DRIGLN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016544457.1	1e-160	PREDICTED: trihelix transcription factor ASIL2
TrEMBL	A0A1U8EB74	1e-159	A0A1U8EB74_CAPAN; Uncharacterized protein
TrEMBL	A0A2G3AM50	1e-159	A0A2G3AM50_CAPAN; trihelix transcription factor ASIL2
STRING	PGSC0003DMT400004269	1e-158	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8028	23	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	8e-46	Trihelix family protein