PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00772g00049.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 82aa MW: 9603.32 Da PI: 11.055 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.5 | 3.6e-11 | 3 | 55 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +hn Er RR+++N ++ r+llP+a +++kKls +++ + eYI +L Peaxi162Scf00772g00049.1 3 KKLKHNTSERSRRKKMNFLYSSPRTLLPSA-TQKKKKLSFPATVSFVQEYIPEL 55 6789*************************7.477777**************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.011 | 2 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.5E-9 | 3 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.91E-5 | 3 | 60 | No hit | No description |
Pfam | PF00010 | 2.4E-8 | 3 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.01E-10 | 3 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence Send to blast |
MAKKLKHNTS ERSRRKKMNF LYSSPRTLLP SATQKKKKLS FPATVSFVQE YIPELKKEIE 60 RLSQTKKFAF IDCVKERISN PA |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up regulated by iron deficiency in roots and leaves, as well as by nickel, high zinc or high copper treatments. Repressed by high iron, low copper and low zinc treatments. {ECO:0000269|PubMed:17516080}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009600422.1 | 5e-31 | PREDICTED: transcription factor ORG2-like | ||||
Swissprot | Q9FYE6 | 1e-16 | BH101_ARATH; Transcription factor bHLH101 | ||||
TrEMBL | A0A1S3YVA5 | 2e-28 | A0A1S3YVA5_TOBAC; transcription factor ORG2-like | ||||
TrEMBL | A0A1S4DCF5 | 5e-28 | A0A1S4DCF5_TOBAC; transcription factor bHLH101-like | ||||
STRING | XP_009600422.1 | 2e-30 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2226 | 22 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04150.1 | 4e-19 | bHLH family protein |