PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00469g00624.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 285aa    MW: 30946.2 Da    PI: 5.8139
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00469g00624.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.43.8e-3076133359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY +eHnh+
  Peaxi162Scf00469g00624.1  76 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTMLLITYCSEHNHS 133
                               99************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-3166135IPR003657WRKY domain
PROSITE profilePS5081131.37669135IPR003657WRKY domain
SuperFamilySSF1182902.62E-2670135IPR003657WRKY domain
SMARTSM007741.2E-3674134IPR003657WRKY domain
PfamPF031062.4E-2576132IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MEVRLNKNPY YIKQEDSTGT PPDNAADSPL SGDEAAEVSM PSPRKSRRGA KKKVITVPIM  60
DADGSRTKGE VYPPPDSWSW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRLDPT  120
MLLITYCSEH NHSLPSSTTT KHHHHHHPTT TTPAISTPTT STEDSNTAAA TDTTTIATAT  180
ATAMQDNSSS PEESAVFTYS NQHDNGFLEL AGELGWLSDM GNSAPTFMES TSAMVGSAWN  240
DSDVAVMLPI KEEDQSLFGD LGELPECSVV FRRYSVETPC CGGTG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-2152136680Disease resistance protein RRS1
5w3x_D3e-2152136680Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593761.11e-152PREDICTED: probable WRKY transcription factor 65 isoform X1
TrEMBLA0A1S4CRB01e-147A0A1S4CRB0_TOBAC; probable WRKY transcription factor 65 isoform X1
TrEMBLA0A1U7YJ901e-147A0A1U7YJ90_NICSY; probable WRKY transcription factor 65 isoform X1
STRINGXP_009593761.11e-151(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.18e-50WRKY DNA-binding protein 69