PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00438g00617.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 444aa    MW: 48381.1 Da    PI: 9.7684
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00438g00617.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-05201223223
                               EETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                Cp Cg++F+  ++L++H+ + H
  Peaxi162Scf00438g00617.1 201 ACPECGEVFPKIESLEHHQAVrH 223
                               6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280200223IPR007087Zinc finger, C2H2
PROSITE profilePS501579.016200228IPR007087Zinc finger, C2H2
SuperFamilySSF563994.22E-24225440No hitNo description
Gene3DG3DSA:3.90.228.101.1E-11226440IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MKKRGSSSTV VLLFHFLALL FMALLTFLPE TSETQKQPSK RRKKQQKQQK KQKEKQPSSW  60
DQFKNLLTCK QIENSTVHDP SSKNPAATAG AYSKLSSCSS ICTFRDVVHG NTRVVHRADN  120
SPESSSLGQE TRLLNKKKTS HHGPSSASSS SRSLARSNGG ASSTYSTSSR GMQFRKLSGC  180
YECHMIVDPS RYPLPRSTIC ACPECGEVFP KIESLEHHQA VRHAVSELGP EDSSRNIVEI  240
IFKSSWLKKD NPICKIERIL KVHNTKRTIQ RFEDCRDAVK IHAVATGKKN PRCAADGNEL  300
LRFYGSSITC SLGARGSSSL CGSVPGCGVC TIIRHGFQGS KPSGVRTTAS SGRAHDCLGS  360
NLAGRKAMLV CRVIAGRVKR LAEDAAATPA KEEENCAGLS APGSATYDSV VGYAGIYSNL  420
EELYVFNPRA ILPCFVVIYD ALES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568396.10.0PREDICTED: uncharacterized protein LOC107866896
TrEMBLA0A1U8GAQ60.0A0A1U8GAQ6_CAPAN; uncharacterized protein LOC107866896
STRINGXP_009616115.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51952334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-166C2H2-like zinc finger protein