PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00188g00813.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 573aa    MW: 62004.5 Da    PI: 5.0833
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00188g00813.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.2e-09355403355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf00188g00813.1 355 NSHSLAERIRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 403
                               58*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-17350421IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.12E-11350407No hitNo description
PROSITE profilePS5088815.434352402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16353419IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-6355403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-10358408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
MDIASKNESE QEKGNEEVMN YQSPNVSSEW QQLSGSNLTN VSMGLISSTL PMVDSFCPSN  60
WDQPTSSQNL GFCDATIQTN HSTANAEMGL GPFRAGVDRT LGTTGWTPPS NAMLKGGIFL  120
SPAPMMLPQS LAQFPADSGF IERAARFSCF SGGNFGDMLN PFSSIPESMN PYYRGLAPMQ  180
GPQEVLASNN ELKSPSTKQH LSNVAESSKD ISLPVDQRNT EISPLKNEKK IETFARSQDE  240
VKEVGGASGN DSDEAECSGR QEEMEGAGEE SYGKDNGSKK RKRGGQDTER DRMKGAQQTP  300
AEPAKDQSEI QRGEQNPNSI ASKPGGKNGK QGSQGSDPTK EDYIHVRARR GQATNSHSLA  360
ERIRREKISE RMKFLQDLVP GCNKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPRL  420
DFNIDGLLAK DILQSRAGPS SSLAFPPDMT MAYPLLHPPH PGMLQSSLPG LGIPSDAFRR  480
AINPHLPTTS GVPGDYKDPP SQAPNVWDNE LHNIVQMGLN SSAPLSSQDL SGTSMLLLSC  540
MIFVSVLEST ALLIIPNFSV LGPLPAGQMK AEP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006348631.10.0PREDICTED: transcription factor bHLH49-like isoform X2
TrEMBLM1BQK60.0M1BQK6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000505850.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28712150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-118bHLH family protein