PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00021g00523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | G2-like | ||||||||
Protein Properties | Length: 608aa MW: 68393.9 Da PI: 5.571 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 82.9 | 3.6e-26 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+ Wtp++H++F++a++qL G+ekA+Pk+i+e+m+ +gLt+ehv+SHLQkYR+ Peaxi162Scf00021g00523.1 213 KRRVIWTPKMHQNFLRAIQQL-GHEKAVPKKIVEIMNEPGLTREHVASHLQKYRM 266 679******************.********************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 3.08E-8 | 25 | 152 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 7.2E-11 | 25 | 164 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 5.0E-26 | 211 | 270 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.14E-18 | 212 | 270 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.3E-24 | 213 | 266 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence Send to blast |
MDIQRVTANS SLEESTTSSD MGTKSICILV VLDDFTCDNI VTDMLHNQTY EVLHVGKIMD 60 TLNGIWERKS NLNLVLTNIH RLNTNGVDIL QIINNKLNLP TILMSPDDAR YENQIQDCNV 120 AAYVVNFSDT DEMNKLWQMA LEKEQGRKAA TNQEANDEKN ALSMPQNVTK SSTENTSSDD 180 NDAEISAHDR KGKRKAFTEK NEENGENRDI EKKRRVIWTP KMHQNFLRAI QQLGHEKAVP 240 KKIVEIMNEP GLTREHVASH LQKYRMCLKR AQESLAATSI YDQILSNDAK DKYFQFQPCL 300 SSPNFITSRG HSHSRQQPFQ AHFQQATDGL GQNLRQPQMV SIHKLSSFQQ QNSYLKFANW 360 RQTNNSGIIG QQFTSLPRLA HASNFRVYGD KTKNMLFSIQ SGSANQPTNS NSGLDFIGFK 420 LSKDGKSVHF GHKGSSCAVI SNNTYSGLCS SMSEGYIQQQ QSSSSFLETP IENTLIQCSS 480 APSENFTFHH LQATFPSTEQ HTSNSISDQQ SVLLFENATN KISCQSLEMP ASILGDLEDY 540 SAILFGDEVS VPAQENCGNY DCRQQEYSAP DEINSFGTEV DIIKSLLETT DNRSSQLFWE 600 GDTENELH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 6e-17 | 211 | 270 | 3 | 62 | ARR10-B |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 192 | 214 | KRKAFTEKNEENGENRDIEKKRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016480490.1 | 0.0 | PREDICTED: two-component response regulator ARR12-like | ||||
TrEMBL | A0A1S4AV91 | 0.0 | A0A1S4AV91_TOBAC; two-component response regulator ARR12-like | ||||
STRING | XP_009598455.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3659 | 16 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 2e-36 | response regulator 1 |