PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00004g02727.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 372aa    MW: 43710 Da    PI: 7.5843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00004g02727.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.86.4e-47762012128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               ppG+rF P deel+++yL+kkv +++l+  + i ev++y++ P++L  k    +ekewyfF++rd+ky++g+r+nra+ +gyWka
  Peaxi162Scf00004g02727.1  76 PPGYRFCPYDEELIMHYLRKKVMNQPLPH-DKIIEVNLYQHSPQELSeKYPVLGEKEWYFFTPRDRKYPNGNRPNRAAGTGYWKA 159
                               9***************************9.7799************9344444899***************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tg dk+++  k+ +vg +k Lvfy+g+ pkg kt+W+mhe+r+
  Peaxi162Scf00004g02727.1 160 TGADKPIKY-KDVKVGFRKALVFYEGKPPKGDKTNWIMHEFRV 201
                               *********.8999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-5771227IPR003441NAC domain
PROSITE profilePS5100555.0375227IPR003441NAC domain
PfamPF023652.1E-2576201IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MKIEQSKAQL TASSWNATTR NPQIQEPNKQ KQVDEDEKVM IVKPNSDDSL SYETKLKLNA  60
KAHIRKDYVD DNFTFPPGYR FCPYDEELIM HYLRKKVMNQ PLPHDKIIEV NLYQHSPQEL  120
SEKYPVLGEK EWYFFTPRDR KYPNGNRPNR AAGTGYWKAT GADKPIKYKD VKVGFRKALV  180
FYEGKPPKGD KTNWIMHEFR VNESRRVKQN AKDMRLDDWV LCRIYKKVDK SFKSTRKDHE  240
QQYASRSCSS VGKMDNCDYE GTVDSSIVAS QNFEPPYQYD ITFDDHIMDY TKYNPDYFSP  300
SLGYGARSNY GMVQPSFSPG SVFWDQKVYQ ESINFPMHLE FANYYQDPYE TMDELQSQNV  360
LSVFDNSSMD KL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-57692279168Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019223930.11e-175PREDICTED: NAC transcription factor 29-like
TrEMBLA0A314KX341e-174A0A314KX34_NICAT; Nac transcription factor nam-b1
STRINGXP_009759087.11e-168(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-65NAC domain containing protein 32