PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032762.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 234aa    MW: 24882.7 Da    PI: 6.0069
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032762.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.1e-1670119155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  Pbr032762.1  70 PVYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPKPEMAAAAYDVAAIALKG 119
                  68****9.55.6*********843...5***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.6E-970119IPR001471AP2/ERF domain
SMARTSM003801.3E-2571133IPR001471AP2/ERF domain
PROSITE profilePS5103218.83471127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2571128IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-1771129IPR016177DNA-binding domain
PRINTSPR003671.6E-57283IPR001471AP2/ERF domain
CDDcd000186.77E-1572129No hitNo description
PRINTSPR003671.6E-5109129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MANPYSNVPK TPVDQPTTTS NPNPFIQIPP TPPSPPTSTL PDDSSSSSSP RLGVRSPSGG  60
STSGSPRGHP VYRGIRCRSG KWVSEIREPR KTTRIWLGTY PKPEMAAAAY DVAAIALKGP  120
NTPLNFPNSI LTYPIPASSA ASEIRSAAAR AAQSRANMLV PRGRESGGRS EPGGVDNERG  180
VVGQQEEEFM DEEALLNMPN LLVDMAEGML VSPPRISSDN SPENSNGENL WNY*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032762.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324780.0GU732478.1 Malus x domestica AP2 domain class transcription factor (AP2D54) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341264.11e-167PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ901e-50ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A498KPT41e-112A0A498KPT4_MALDO; Uncharacterized protein
STRINGXP_009341264.11e-166(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.15e-43ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]